CXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTCAACTGAGAAATACCGAATGGCTGAGAAGCACCTGAAAAAATGTT
CAGCATCCTTAATCATCAGAGAAATGCAATCAAAAAAACCCTGAGATTCC
ACCCGACACCAGTAAGAATTGCTAAGATCAAAAATTCAGGTGACAGCAGA
TTCTCACGAGGATGTGGAGAAAGAGGAACACTCCTCCATTTTTGTTGGGA
TTGCAAGCTTGTACAACCACTCTGGAAATCATTGTGGCGGTTCCTCAGAA
AACTGGATATAGTACTACTGGAGGATCCTGCAATACCTCTCCTGGGCATA
TATTCAGAAGATGTTCCAACCGGTAAGAATGACACATGCTCCACTATGTT
CATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAGAGAACCCAGGTGCC
CCTCAACAGAGGAATGGATACAGAAAATGTGGTACATTTACACAATGGAG
TACTACTCAGCTATTAAAAAGAATGAATTTATGAAATACCTAGCCAAATG
GATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACCCAATCACAAAGGA
ACTCACACAATATGTACTCACTGGTAAGTGGATATTAGCCCAGAAACTTA
AGATACCCAATATATAAGATACAATTTGCTAAACACATGAAACTCAAGAA
GACCGAAGACCAAAGTGTGGACACTGTGCCCCTTCTTAGAATTGGGAATA
AACACCCTAAGGAGGAGTTACAGAAACAAAGATTGGAGC

CGATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXCTTTAAATCCTTTTCTGAAAAATCGTT
TTGTCAAACATGCACACAGTACCTTACACGTACTGTAGTTTCCTCATTAC
CTGCCTGTATCTCCAGACAATTTGAGATAATTGAACTGGACAATTCCAGA
CAAATTGGACTAATTAGCCTACCTCAGGATATTCTCTAATGTTCAAACAA
TGGGTAATGGAGTATGGTCAGCGTTCTTATCTTCATCATAAAGCAGTGAA
TGACAGCACGTTTCCCTGACAGTGCATTATCTATATTAATACTGACTTAA
TATTAAAGTGTTACATTACTTATTTCTTGTCCCATATTAAGAAATAAAAC
ATGTTTTAAAAAGAACTTTTATATGAAAATGACATAATTTAATTTAAAAA
AGGCAACATTATCTTTAAATATGCATGCTACCTTCTGTTGGTTTTTAAGA
TGCCCTGGCATACTCGATGGCGTTGTCCGTCCCCCCACTCAGTTCTTCCC
CTGTTCACTTATTGATGTGCTTTCTTATCCCTGACTCAAAAGAATTTTAC
TCTTTCAAAACTCAGCAATTTCTGTCCACTTTACATATAATTTTTAAAGT
CTGTATAAAATTAAAAATTGATTTTTCAGTTGCCTTAAAGCTGCCTAAAA
CCAAAATTAGCATAATGAGTACGAATTAGCACATGATGTTATAGAATACA
GGTGATGCCCTGCGGAAGTGGGCTGTGGTTA

Query= MSMg01no520_j08.g1 MSMg01no520_j08.g1 CHROMAT_FILE:
MSMg01no520_j08.g1 PHD_FILE: MSMg01no520_j08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:53:40 2005
         (624 letters)



>mm_chr3_140402150_140403173
          Length = 1024

 Score = 1183 bits (612), Expect = 0.0
 Identities = 621/624 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   ctttaaatccttttctgaaaaatcgttttgtcaaacatgcacacagtaccttacacgtac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 824 ctttaaatccttttctgaaaaatcgttttgtcaaacatgcacacagtaccttacacgtac 765

                                                                       
Query: 61  tgtagtttcctcattacctgcctgtatctccagacaatttgagataattgaactggacaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 764 tgtagtttcctcattacctgcctgtatctccagacaatttgagataattgaactggacaa 705

                                                                       
Query: 121 ttccagacaaattggactaattagcctacctcaggatattctctaatgttcaaacaatgg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 ttccagacaaattggactaattagcctacctcaggatattctctaatgttcaaacaatgg 645

                                                                       
Query: 181 gtaatggagtatggtcagcgttcttatcttcatcataaagcagtgaatgacagcacgttt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 gtaatggagtatggtcagcgttcttatcttcatcataaagcagtgaatgacagcacgttt 585

                                                                       
Query: 241 ccctgacagtgcattatctatattaatactgacttaatattaaagtgttacattacttat 300
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 584 ccctgacagtgcattatctatattaatattgacttaatattaaagtgttacattacttat 525

                                                                       
Query: 301 ttcttgtcccatattaagaaataaaacatgttttaaaaagaacttttatatgaaaatgac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 ttcttgtcccatattaagaaataaaacatgttttaaaaagaacttttatatgaaaatgac 465

                                                                       
Query: 361 ataatttaatttaaaaaaggcaacattatctttaaatatgcatgctaccttctgttggtt 420
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 ataatttaattaaaaaaaggcaacattatctttaaatatgcatgctaccttctgttggtt 405

                                                                       
Query: 421 tttaagatgccctggcatactcgatggcgttgtccgtccccccactcagttcttcccctg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 tttaagatgccctggcatactcgatggcgttgtccgtccccccactcagttcttcccctg 345

                                                                       
Query: 481 ttcacttattgatgtgctttcttatccctgactcaaaagaattttactctttcaaaactc 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 ttcacttattgatgtgctttcttatccctgactcaaaagaattttactctttcaaaactc 285

                                                                       
Query: 541 agcaatttctgtccactttacatataatttttaaagtctgtataaaattaaaaattgatt 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 agcaatttctgtccactttacatataatttttaaagtctgtataaaattaaaaattgatt 225

                                   
Query: 601 tttcagttgccttaaagctgccta 624
           |||||||||||| |||||||||||
Sbjct: 224 tttcagttgcctcaaagctgccta 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 624
Length of database: 1024
Length adjustment: 10
Effective length of query: 614
Effective length of database: 1014
Effective search space:   622596
Effective search space used:   622596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)