NNAAATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCTCACCTGAGGAATACCGAATGGCAGAGAAGCACCTGAAAAA
ATGTTCAACATCTTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGA
GATTCCACCTCACACCAGTCAGAACGGCTAAGATAAAAAATTCAGCTGAC
AGCAGATGCTGGCGATGATGTGGAGAAAGAGGAATACTCTTCCATTGTTG
GTGGAATTGCAGGCTTGTACAACCACTCTGAAAATCAGTCTGGTGGTTCC
TCAGAAAATTGGACATAGTACTACCGGAGGATCCAGCATATATCTCCTGG
GCATATATCCAGAAGATGTCCCAACCGGTAAGAAGGACACATGCTCTACT
ATGTTCATAGCAGCCTTATTTATAATAGTCAGAAGCTGGAAAGAACCCAG
ATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATCTACACAA
TGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTAGGC
AAATGGATGGACCTGCAGGGCATCATCCTGAGTGAGGTAACCCAATCACA
AAGGACCTCACACAACATGTACTCACTGATAAGTGGATATTAGCCCAGAA
ACTTAGGATACCCAAGATATAAGATACAATTTGCTAAACGCATGAAACTC
AAGAAGAACGATGATCAAAGTGTGGACACTTTGCCCCTTCTTAGAATTGG
GAACAAAACA

NNAACGATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTAAAGCTTTAGCATTAAAAA
TTCACAGAGCCTACAAAATTAAAGATAGGAAAATCTATTAGGTTATCTTT
CTTCTCCCAGAAAGGGATTACTTCAGAGGGAAGAACTATAAAAATGAAAA
TAATATGTGAGACCATGATAATATCAACATTGGCAATGAGAGGGGAAAGG
ATGCATGGTATTAGCTGCAAAAAAAAAAAAAAAAAAAAGCAGCTGGAATA
AACAGGTTCTTCTTTAAACAATCATGACCACAGTCTATGCATTATTTGCT
TGTCAAAGACCTTATAATTATGCTATCCTGATTCTTGTTTTGTTTTGTTT
TAACTCTTAAGTGGACTTCAGACCGTTTTCTGTTATAAATAAGCAGCAGA
AGTGGAAATATGATTAAAAATCCCCAACATGAATTATCGCATGGGACTGA
TTTAACAAGCTTAATTTTAATTCTCAGTATAGAATTCAGTTTAATCTCAC
TGTAGGCCATGTGCATTTTGTTACATGCTATGTCCCAAAATTGACATGAC
ACTGTGTCACATATATGTTAGAAAGAGATTGTTGGTGAATTTTCATGTTA
CTACTGTCTCTGATTTTATGTGTCATAACCAATGAGCATCATTATCTTGA
ATGTAAAATTAGATAATTACCTTTGGATTTATCCGTTGCCACCAGGCAGC
AGTGTCC

Query= MSMg01no520_n17.g1 MSMg01no520_n17.g1 CHROMAT_FILE:
MSMg01no520_n17.g1 PHD_FILE: MSMg01no520_n17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:54:01 2005
         (659 letters)



>mm_chr3_29295974_29297032
          Length = 1059

 Score = 1234 bits (638), Expect = 0.0
 Identities = 655/662 (98%), Gaps = 3/662 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tttaaagctttagcattaaaaattcacagagcctacaaaattaaagataggaaaatctat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 tttaaagctttagcattaaaaattcacagagcctacaaaattaaagataggaaaatctat 257

                                                                       
Query: 61  taggttatctttcttctcccagaaagggattacttcagagggaagaactataaaaatgaa 120
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 taagttatctttcttctcccagaaagggattacttcagagggaagaactataaaaatgaa 317

                                                                       
Query: 121 aataatatgtgagaccatgataatatcaacattggcaatgagaggggaaaggatgcatgg 180
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 318 aataatatgtgagaccatgataatatcaacattggcaacgagaggggaaaggatgcatgg 377

                                                                       
Query: 181 tattagctgcaaaaaaaaaaaaaaaaaaaa---gcagctggaataaacaggttcttcttt 237
           ||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||
Sbjct: 378 tattagctgcaaaaaaaaaaaaaaaaaaaaaaagcagctggaataaacaggttcttcttt 437

                                                                       
Query: 238 aaacaatcatgaccacagtctatgcattatttgcttgtcaaagaccttataattatgcta 297
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 aaacaatcgtgaccacagtctatgcattatttgcttgtcaaagaccttataattatgcta 497

                                                                       
Query: 298 tcctgattcttgttttgttttgttttaactcttaagtggacttcagaccgttttctgtta 357
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 tcctgattcttgttttgttttgttttaactcttaagtggacttcagaccgttttctgtta 557

                                                                       
Query: 358 taaataagcagcagaagtggaaatatgattaaaaatccccaacatgaattatcgcatggg 417
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 taaataagcagcagaagtagaaatatgattaaaaatccccaacatgaattatcgcatggg 617

                                                                       
Query: 418 actgatttaacaagcttaattttaattctcagtatagaattcagtttaatctcactgtag 477
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 actgatttaacaagcttaattttaattctcagtatagaattcagtttaatctcactgtag 677

                                                                       
Query: 478 gccatgtgcattttgttacatgctatgtcccaaaattgacatgacactgtgtcacatata 537
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 gccatgtgcattttgttacatgctatgtcccaaaattgacatgacactgtgtcacatata 737

                                                                       
Query: 538 tgttagaaagagattgttggtgaattttcatgttactactgtctctgattttatgtgtca 597
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 tgttagaaagagattgttggtgaattttcatgttactactgtctctgattttatgtgtca 797

                                                                       
Query: 598 taaccaatgagcatcattatcttgaatgtaaaattagataattacctttggatttatccg 657
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 taaccaatgagcatcattatcttgaatgtaaaattagataattacctttggatttatccg 857

             
Query: 658 tt 659
           ||
Sbjct: 858 tt 859


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 43
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 659
Length of database: 1059
Length adjustment: 10
Effective length of query: 649
Effective length of database: 1049
Effective search space:   680801
Effective search space used:   680801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)