Query= MSMg01no521_i09.b1 MSMg01no521_i09.b1 CHROMAT_FILE:
MSMg01no521_i09.b1 PHD_FILE: MSMg01no521_i09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:54:53 2005
(381 letters)
>mm_chr3_130822293_130823073
Length = 781
Score = 696 bits (360), Expect = 0.0
Identities = 378/388 (97%), Gaps = 7/388 (1%)
Strand = Plus / Plus
Query: 1 ccagctaagtatgctggctttcccccct-------caagcataggatatatttttcaagt 53
|||||||||||||| ||||||||||||| |||||||||||||||||||||||||
Sbjct: 194 ccagctaagtatgcgggctttcccccctttaccctcaagcataggatatatttttcaagt 253
Query: 54 gtatttcgtgtaatgtttgcatgtggctatcaggagaacgggttgggtagttcctcttca 113
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 gtatttcgtgtaatgtttgcatgtggctatcaggagaacgggttgggtagttcctcttca 313
Query: 114 gagtccctggacattctgtctggtccttcctcacgacacgaccgcaaagcaggggaagac 173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 gagtccctggacattctgtctggtccttcctcacgacacgaccgcaaagcaggggaagac 373
Query: 174 ttatgattgacaggaatttggagcagtcaccgtccctcccctcagatagctccaatctct 233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 ttatgattgacaggaatttggagcagtcaccgtccctcccctcagatagctccaatctct 433
Query: 234 aacgattctgcttactgtagtgtgccagggagcctcaatcccaggacttgatgccgtatg 293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 aacgattctgcttactgtagtgtgccagggagcctcaatcccaggacttgatgccgtatg 493
Query: 294 tactgattcactgtccctcgcttggtcgttgtcttttgaattgcccctggcaggtttttt 353
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 tactgattcactgtccctcacttggtcgttgtcttttgaattgcccctggcaggtttttt 553
Query: 354 tgtttgcttgttttataaggacatgagg 381
||||||||||||||| ||||||||||||
Sbjct: 554 tgtttgcttgttttagaaggacatgagg 581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 381
Length of database: 781
Length adjustment: 9
Effective length of query: 372
Effective length of database: 772
Effective search space: 287184
Effective search space used: 287184
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no521_i09.g1 MSMg01no521_i09.g1 CHROMAT_FILE:
MSMg01no521_i09.g1 PHD_FILE: MSMg01no521_i09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:54:53 2005
(378 letters)
>mm_chr3_130972182_130972959
Length = 778
Score = 708 bits (366), Expect = 0.0
Identities = 375/378 (99%)
Strand = Plus / Minus
Query: 1 atgtgctgagcgcaggcagttgggcgatctgcatgttggtgaaacagtaaagcagttgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 atgtgctgagcgcaggcagttgggcgatctgcatgttggtgaaacagtaaagcagttgct 519
Query: 61 tggtctctgcagtttctctagagcagagggtctgtaggaatatggaaaaggaataaagga 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 518 tggtctctgcagtttctctagagcagagggtctgtaggaatatggaaaagcaataaagga 459
Query: 121 attaactgacacacacatagcatatagctccaagaagccagaagtgtcattgtgatcatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 attaactgacacacacatagcatatagctccaagaagccagaagtgtcattgtgatcatt 399
Query: 181 ggcaccattgctgccatctgtcctcttgtccttttagcctcaggccccttttgttcctga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 ggcaccattgctgccatctgtcctcttgtccttttagcctcaggccccttttgttcctga 339
Query: 241 tctccatgttgaggcatgagccttgggtttaggtaggaaatatcttgcttaaccctgaca 300
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 tctccatgttgaggcaggagccttgggtttaggtaggaaatatcttgcttaaccctgaca 279
Query: 301 cagatcccagctgacagacagtgcattttgctcacgagctgctgagaaggacagcacctt 360
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 278 cagatcccagctgacagacagtgcagtttgctcacgagctgctgagaaggacagcacctt 219
Query: 361 ttatttaattattccacc 378
||||||||||||||||||
Sbjct: 218 ttatttaattattccacc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 378
Length of database: 778
Length adjustment: 9
Effective length of query: 369
Effective length of database: 769
Effective search space: 283761
Effective search space used: 283761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
