NATGATACTGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXCGCGGAATTCATATACTCATGCATAATTATGTGGGGTGGGCATAAGGG
GGTGATTTTTAACCATATGAATATATATGTGTGTTTGTGGTTGTTTAATT
TTATATATATATATAGAAGAAAAAGAGTTAAGAAAGACATTGCAAACTGG
TGGAACAACTGTAGGAACAAGCATGGCAAATGCTCAAAAGCTAAAAATAT
GTCCACTATATGCTACTATATGATCAGGTATAAACATTATGTGTTTTATT
TCTATTGAACAGTCATAAGATCAGCCATGACATGACCTCACTATACTGCA
AAGGATTCTGAAAATGAAAGAGCACTCAAATGCATGAAGAGGAAATAAGA
AAAATGTGAGAAATCTTCATCTATTATATATCTGACTGGAGATTGAAATC
CAAAGTATTCATGATATATATCAAAATACCCTACTTATTTATTTTATTGA
GTTCTTGAGGCAAGGTCTTACTGGGTATCCATGGTTGGCCTGGAACTTTG
AATGTATAATAGGCTGTATACACTCATAGAGCTATATCTGCCTCCCAAAT
GATGGAAATTTGGCATGTATGTATATGATATCTGGTCTGACCTCTTGGTA
TTAGATGATCAAAAAGGGATAAATCCAGGGAAAATTTATTCTCTTTCTCA
GCAGTTAATAGTTTCCTTGATTATGTAGCAGAAGGGTAGGN

NTTTTAACGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTCATCCCCATTGAAGAA
ACTTCACTGCAACATACAGACATTGTTATAGATTTTTACCATCAAATAAA
ATGAAGACTTGTTGAGCCCAGTCCCAATGGACACATGTACAAAACAACTC
ATACACCTATGGCTCAGAGCACATTGCAGAAGAAAGGGGGAAAAGACTGT
AAGAGCCAGAATATCAGGAAAGATGCTGTAAGACTGGGTCATAGCTGTGT
CAGATGCTTCATGGGCTAATTCTCACTAAAATGACTGCCTAAACTTAAAT
CAAGCTAGTACAACAGTAGATATGCCAAAGCAGAGGGGGAAAGATTGTGA
GGTCTCAGTCCTAAGCCAAGACTACAGGCAACTAAGGAATGCTGACAGTG
GGAGAAAAATAGTCCTAACCAGGGAAGAGCAGATCAACTGGTTCTCCAAT
ACCAAGAAGTCAGCCTTGAAAACATACATATACCATATTCAGACTGAGTT
TATTATATTTAGAAATATATTTGTATGTACATATATACATTTGACAGTAA
CTAATAAAACATAGACCATAATTTTGAAAGAGAGCAAAGAAGGGTATATG
GGAGGGTTTGAAGGGATGAAAGGAAAGAAGCAAATAATATAATTTTGGAT
AGGATCATTTTATATTCAACATTTTAAAAAGCCAAGTTGA

Query= MSMg01no522_a17.b1 MSMg01no522_a17.b1 CHROMAT_FILE:
MSMg01no522_a17.b1 PHD_FILE: MSMg01no522_a17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:55:33 2005
         (651 letters)



>mm_chr3_112947822_112948872
          Length = 1051

 Score = 1210 bits (626), Expect = 0.0
 Identities = 641/648 (98%), Gaps = 5/648 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcatatactcatgcataattatgtggggtgggcataaggggg-tgatttttaacca 63
           |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 204 gaattcatatgctcatgcataattatgtggggtgggcataaggggggtgatttttaacca 263

                                                                       
Query: 64  tatgaatatatatgtgtgtttgtggttgtttaattttatatatatatatagaagaaaaag 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tatgaatatatatgtgtgtttgtggttgtttaattttatatatatatatagaagaaaaag 323

                                                                       
Query: 124 agttaagaaagacattgcaaactggtggaacaactgtaggaacaagcatggcaaatgctc 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 agttaagaaagacattgcaaactggtggaacaactgtaggaacaagcatggcaaatgctc 383

                                                                       
Query: 184 aaaagctaaaaatatgtccactatatgctactatatgatcaggtataaacattatgtgtt 243
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 384 aaaagctaaaaatatgtccactatatgttactatatgatcaggtataaacattatgtgtt 443

                                                                       
Query: 244 ttatttctattgaacagtcataagatcagccatgacatgacctcactatactgcaaagga 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ttatttctattgaacagtcataagatcagccatgacatgacctcactatactgcaaagga 503

                                                                       
Query: 304 ttctgaaaatgaaagagcactcaaatgcatgaagaggaaataagaaaaatgtgagaaatc 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ttctgaaaatgaaagagcactcaaatgcatgaagaggaaataagaaaaatgtgagaaatc 563

                                                                       
Query: 364 ttcatctattatatatctgactggagattgaaatccaaagtattcatgatatatatcaaa 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ttcatctattatatatctgactggagattgaaatccaaagtattcatgatatatatcaaa 623

                                                                       
Query: 424 ataccctacttatttattttattgagttcttgaggcaaggtcttactgggtatccatggt 483
           ||||||||    ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 atacccta----tttattttattgagttcttgaggcaaggtcttactgggtatccatggt 679

                                                                       
Query: 484 tggcctggaactttgaatgtataataggctgtatacactcatagagctatatctgcctcc 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tggcctggaactttgaatgtataataggctgtatacactcatagagctatatctgcctcc 739

                                                                       
Query: 544 caaatgatggaaatttggcatgtatgtatatgatatctggtctgacctcttggtattaga 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 caaatgatggaaatttggcatgtatgtatatgatatctggtctgacctcttggtattaga 799

                                                           
Query: 604 tgatcaaaaagggataaatccagggaaaatttattctctttctcagca 651
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 tgatcaaaaagggataaatccagggaaaatttattctctttctcagca 847


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1051
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1041
Effective search space:   667281
Effective search space used:   667281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)