Query= MSMg01no522_a23.b1 MSMg01no522_a23.b1 CHROMAT_FILE:
MSMg01no522_a23.b1 PHD_FILE: MSMg01no522_a23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:55:34 2005
(532 letters)
>mm_chr3_92369101_92370031
Length = 931
Score = 1021 bits (528), Expect = 0.0
Identities = 531/532 (99%), Gaps = 1/532 (0%)
Strand = Plus / Plus
Query: 1 ctcataccaaagtaactaactacaaaatgtgggaattcctaggcccaatgaaagagataa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctcataccaaagtaactaactacaaaatgtgggaattcctaggcccaatgaaagagataa 260
Query: 61 gctgaaatgcagcactcataaaagatttcaacagcacactctcaccagcatacacatcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gctgaaatgcagcactcataaaagatttcaacagcacactctcaccagcatacacatcat 320
Query: 121 cagtgaagaaaatcagaggtatgcaaaagaatttaattacaccatatatcaaatatacat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagtgaagaaaatcagaggtatgcaaaagaatttaattacaccatatatcaaatatacat 380
Query: 181 gacatccaagacatcagaatatacacattgttctctccttgcaagtattttagctgtagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gacatccaagacatcagaatatacacattgttctctccttgcaagtattttagctgtagg 440
Query: 241 tggcaccattgttccagttttgctacaagtcagttggcattatgtaggtgtttcagaact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tggcaccattgttccagttttgctacaagtcagttggcattatgtaggtgtttcagaact 500
Query: 301 aaggaccaacaccccccaaaaaaaatcacagatttatatttagtatgttgttcaccatga 360
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 501 aaggaccaacaccccccaaaaaaa-tcacagatttatatttagtatgttgttcaccatga 559
Query: 361 aggaggaaatcaactacagataattttctgtccctagtgtcttctccctggagccagggt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 aggaggaaatcaactacagataattttctgtccctagtgtcttctccctggagccagggt 619
Query: 421 agacctcaatgactcctcagtgtcagcctgaggttagacactatgggattcccaccatct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 agacctcaatgactcctcagtgtcagcctgaggttagacactatgggattcccaccatct 679
Query: 481 ctggatcaactcggataaactagctagaagctcctgtgtctcgacactgtgt 532
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 ctggatcaactcggataaactagctagaagctcctgtgtctcgacactgtgt 731
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 532
Length of database: 931
Length adjustment: 10
Effective length of query: 522
Effective length of database: 921
Effective search space: 480762
Effective search space used: 480762
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no522_a23.g1 MSMg01no522_a23.g1 CHROMAT_FILE:
MSMg01no522_a23.g1 PHD_FILE: MSMg01no522_a23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:55:34 2005
(509 letters)
>mm_chr3_92525613_92526521
Length = 909
Score = 977 bits (505), Expect = 0.0
Identities = 508/509 (99%)
Strand = Plus / Minus
Query: 1 atgtagcaccaaagagtcacgtcataagggtcttgacttctgttaagtgatttacagccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 atgtagcaccaaagagtcacgtcataagggtcttgacttctgttaagtgatttacagccc 650
Query: 61 tgaacaagtctttgctaatgactttgtgatagttatacttttgagtgctagggtctttta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 tgaacaagtctttgctaatgactttgtgatagttatacttttgagtgctagggtctttta 590
Query: 121 ttgcatctgatgctgcagcataataaatcaatgatcaaggggatttaggggaactgtttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 ttgcatctgatgctgcagcataataaatcaatgatcaaggggatttaggggaactgtttt 530
Query: 181 gagttagaacattgggtatgtataactattagacgtagtttttaagtcattatgatattc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 gagttagaacattgggtatgtataactattagacgtagtttttaagtcattatgatattc 470
Query: 241 agacatgcagacagatgatagcagatgaatatagactataggacatagaggatcatgcat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 agacatgcagacagatgatagcagatgaatatagactataggacatagaggatcatgcat 410
Query: 301 ctctataggaaatatcctacacatttataaattcccatgcttctccgctgtattttactt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 ctctataggaaatatcctacacatttataaattcccatgcttctccgctgtattttactt 350
Query: 361 gtgcttgtcactctcatgtacaggaggctcatgttattcccaagacttaggaactcagag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 gtgcttgtcactctcatgtacaggaggctcatgttattcccaagacttaggaactcagag 290
Query: 421 ttcattagcatttagtttgttttttctttgcttcttatcactgccatattatatatatat 480
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 289 ttcattagcatttagtttgttttttctttgcttcttatcactgccatattttatatatat 230
Query: 481 agtgatatcaaagtatgacttattacaat 509
|||||||||||||||||||||||||||||
Sbjct: 229 agtgatatcaaagtatgacttattacaat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 509
Length of database: 909
Length adjustment: 10
Effective length of query: 499
Effective length of database: 899
Effective search space: 448601
Effective search space used: 448601
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
