GGAAACTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCAGAGGATC
CGCGGAATTCCTAAGAATATTAAGATTTCTCATGAATTTGTTATTCACTC
TCAAAGGTTCCACTTTAAAGACAGCCTCTCTGATTTGCTAGAGCTTAGTA
TTAAGGGTGCTCCACTAACGACAGATGCTCTGATCTCCCATTCTTATCCT
AATAAGTATTACCAACAATAGTACAAACCTTTCCTTGAGGGAGGGAGAAA
CAAGCTTTGTTTGTAGCGCAGGCCTTAAGGATGTATAGGCTGAAACATTA
AATACGGCAGTCATATGTACTGGTAGCCACCTACCTTCAAAAGATGGCTA
CTATTCTCGTTCTTTTCTGTCCAATTTGAAGAATGCTGGAGGAAACCATC
CTGTGTGGTCTTGAGCAATTTGCTGCACCTCTGAGGCTTGTTTTCTCAAC
TATAAAATGTGAATTAAATACCTACATCATTAAATGGTTGTGAGAAATTA
ATGAGATGTTTACAACACACTTAACAAAATGCCTACAACCGAGACATGGC
TTCAGCAAATGGGTAATAATAGCAATAACAACTTAGTTCTGCTTTGTGGA
AACTGTTGCCTGAGAACCCTTTTGGGGTGGAGGCATGATATAAGCTAGGA
AGAGAATTTCAGACAGCAGAGCCAAGGTGGCTGAGGATGATCTGAGTAGA
GGAAGGGAACAGAAAGCTTCCTGACAGAGCAATAAAACTAGGGAGGGAAG
CAGCAG

TTTTTCATTTTGTGAAGTGATGGGTGGGGAAAGGAACACATTCTNTNNNN
NNTTTNTNNNTTTTTAAAAGCCAATGAAAAAGGGGGAAAGGGTCTGGGTG
GGGAAGGGCCGGGGGGGCGGTTCAAAAATGAAGAGGGGGGAAAAATAAAA
AAAAAGGGATCTCGCCGGAAAAAAAAAGGGGGGGGTTAAAAAAAAGAAAA
AAATTTGTGAAAAAAAGGGGGGGGTTTTTATAATTTTTTATAAAAAGAAA
AAAAAAAAAAAAATAGGGGGGGTGGAGTGTGGAAAAAAAAAAGAAAATAC
CAAGAGGAAAGGAGAGGGGGTTGTCTCGAGGAGGAGGGGGGGGGGGGTTT
TTTTTTTTTTTCAAAAAAAAAAAAAGAGTAGTGAAAAAAAAAAAAGAGGA
GAGAGGTGAGTTGACAGCAGGATTGCTGGCGGGGGGGGGGGGGGGGGGTG
TGGGTGAAGAAAAAAAAAAAAAAAGAAGAAAATAGGGTGTGGTGGCTGGG
GAGCGGAGGCGGGAGCGGGCCGCGGNGTTAGTATATTTGTGGGGAGGGGG
GAGGGGGAGTGGTGAGGGGTTGGGAAGAGATGAGAGGAAGATAATTAAAA
AAAAAAAAAAAGTGAAAAGAAGAAGAGAGGGGGTGGAAAGGTAGGAGGAG
TACCTAAAAAAATTTAAATATATGAAAAGAGAAAAAAGAAAGACAGAAGT
AATAAAGGAGGGNGGAGAGGCGGTGGATGGTTGGGGGAGGGGGGGACTAG
AGAGGGAAAAAAAGTGTTATTTTTTTN

Query= MSMg01no522_c20.b1 MSMg01no522_c20.b1 CHROMAT_FILE:
MSMg01no522_c20.b1 PHD_FILE: MSMg01no522_c20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:55:43 2005
         (690 letters)



>mm_chr3_19244379_19245468
          Length = 1090

 Score = 1044 bits (540), Expect = 0.0
 Identities = 552/556 (99%)
 Strand = Plus / Minus

                                                                       
Query: 11  gaattcctaagaatattaagatttctcatgaatttgttattcactctcaaaggttccact 70
           |||||||||||||||  |||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 556 gaattcctaagaataaaaagatttctcatgaatttgttatttactctcaaaggttccact 497

                                                                       
Query: 71  ttaaagacagcctctctgatttgctagagcttagtattaagggtgctccactaacgacag 130
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 ttaaagacagcctctctgatttgctagagcttagtattaagggtgctccactaacgacag 437

                                                                       
Query: 131 atgctctgatctcccattcttatcctaataagtattaccaacaatagtacaaacctttcc 190
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 atgctctgatctcccattcttatcctaataagtattaccaacaatagtacaaacctttcc 377

                                                                       
Query: 191 ttgagggagggagaaacaagctttgtttgtagcgcaggccttaaggatgtataggctgaa 250
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 376 ttgagggagggagaaacaagctttgtttgtagcgcaggccttaaggatatataggctgaa 317

                                                                       
Query: 251 acattaaatacggcagtcatatgtactggtagccacctaccttcaaaagatggctactat 310
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 acattaaatacggcagtcatatgtactggtagccacctaccttcaaaagatggctactat 257

                                                                       
Query: 311 tctcgttcttttctgtccaatttgaagaatgctggaggaaaccatcctgtgtggtcttga 370
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 tctcgttcttttctgtccaatttgaagaatgctggaggaaaccatcctgtgtggtcttga 197

                                                                       
Query: 371 gcaatttgctgcacctctgaggcttgttttctcaactataaaatgtgaattaaataccta 430
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 gcaatttgctgcacctctgaggcttgttttctcaactataaaatgtgaattaaataccta 137

                                                                       
Query: 431 catcattaaatggttgtgagaaattaatgagatgtttacaacacacttaacaaaatgcct 490
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 catcattaaatggttgtgagaaattaatgagatgtttacaacacacttaacaaaatgcct 77

                                                                       
Query: 491 acaaccgagacatggcttcagcaaatgggtaataatagcaataacaacttagttctgctt 550
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76  acaaccgagacatggcttcagcaaatgggtaataatagcaataacaacttagttctgctt 17

                           
Query: 551 tgtggaaactgttgcc 566
           ||||||||||||||||
Sbjct: 16  tgtggaaactgttgcc 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 690
Length of database: 1090
Length adjustment: 10
Effective length of query: 680
Effective length of database: 1080
Effective search space:   734400
Effective search space used:   734400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)