Query= MSMg01no523_g01.b1 MSMg01no523_g01.b1 CHROMAT_FILE:
MSMg01no523_g01.b1 PHD_FILE: MSMg01no523_g01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:57:16 2005
(581 letters)
>mm_chr3_39624437_39625417
Length = 981
Score = 1079 bits (558), Expect = 0.0
Identities = 573/578 (99%)
Strand = Plus / Minus
Query: 4 ggaattctaaaaataggctagatgaagaattaagctggtaaatatttgatttataaacta 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 ggaattctaaaaataggctagatgaagaattaagctggtaaatatttgatttataaacta 659
Query: 64 atctgtttttccttttgtccctctcaatttcagttgtactttacaggcaaaggacattag 123
|||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||
Sbjct: 658 atctgtttttccttttgtccctctcaatttcaattgtactttacaggcgaaggacattaa 599
Query: 124 cttcataatcatgactttaagcttcaaattgaaaacacttcactggttgaccaaacttat 183
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 cttcgtaatcatgactttaagcttcaaattgaaaacacttcactggttgaccaaacttat 539
Query: 184 cattcgttaggaatgtctacatctggtctgatggggagtccagtgtttgcatttcccaag 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 cattcgttaggaatgtctacatctggtctgatggggagtccagtgtttgcatttcccaag 479
Query: 244 cctcactgctgagctgagctgatttcctggccagtttataaagctttgctttttatagct 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 cctcactgctgagctgagctgatttcctggccagtttataaagctttgctttttatagct 419
Query: 304 actcaatgtacagcctatatagcctatacctccctgaagcagtttctttctttttccatc 363
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 actcaatgtacaggctatatagcctatacctccctgaagcagtttctttctttttccatc 359
Query: 364 tgttcagaaagcatcattcacactacataaagccatagcatctggaaaggaaaatgagtc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 tgttcagaaagcatcattcacactacataaagccatagcatctggaaaggaaaatgagtc 299
Query: 424 tgatcaaatcagtcaactaacaggaatagacatatttatattttatttgggggaaattac 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 tgatcaaatcagtcaactaacaggaatagacatatttatattttatttgggggaaattac 239
Query: 484 ttagtaataaaacaagattaataagaaacagtatggaggccagagagatggctcagcagt 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 ttagtaataaaacaagattaataagaaacagtatggaggccagagagatggctcagcagt 179
Query: 544 taagtgtgataatgggatgctcttccaaagaactcagg 581
||||||||||||||||||||||||||||||||||||||
Sbjct: 178 taagtgtgataatgggatgctcttccaaagaactcagg 141
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 581
Length of database: 981
Length adjustment: 10
Effective length of query: 571
Effective length of database: 971
Effective search space: 554441
Effective search space used: 554441
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no523_g01.g1 MSMg01no523_g01.g1 CHROMAT_FILE:
MSMg01no523_g01.g1 PHD_FILE: MSMg01no523_g01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:57:16 2005
(644 letters)
>mm_chr3_39433378_39434423
Length = 1046
Score = 1191 bits (616), Expect = 0.0
Identities = 638/646 (98%), Gaps = 2/646 (0%)
Strand = Plus / Plus
Query: 1 ttatcaacatcttaatttccccagtttacttgtgattatgtctattaaattgtcattagc 60
|||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||
Sbjct: 201 ttatcaacatcttaatttccccagttcacttgtgattatttctattaaattgtcattagc 260
Query: 61 ttctaccaatagtgtgaacattctgtggcctttatttatagctgtgttacctgctgttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttctaccaatagtgtgaacattctgtggcctttatttatagctgtgttacctgctgttct 320
Query: 121 cttcaggagacaatttacatctttctggagtagatgggagaatttcacagtgatttacga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 321 cttcaggagacaatttacatctttctggagtagatgggagaatttcacagtgatttagga 380
Query: 181 accagctggatatagaaacgtttttttctctgcctcggaaggaacatgtatttcatctac 240
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 381 accagctggatatagaaacgtttttttctctgcctaggaaggaacatgtatttcatctac 440
Query: 241 ttcgatgtgctagaatgcaggatgcttttgtattcacagtgactcagacatcttcctgga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttcgatgtgctagaatgcaggatgcttttgtattcacagtgactcagacatcttcctgga 500
Query: 301 ttttcactctgaaaagatgttggtgtagaactttcaaaaaaaa--tccatcctgtaaata 358
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 501 ttttcactctgaaaagatgttggtgtagaactttcaaaaaaaaaatccatcctgtaaata 560
Query: 359 ataatttgctaagacattctggcagaattatgttcaattatgggcctggaaaggaatgca 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ataatttgctaagacattctggcagaattatgttcaattatgggcctggaaaggaatgca 620
Query: 419 cagttactacacagagtggggaaattgaaatgaactgacacatgtgtgccaggatcttct 478
||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||
Sbjct: 621 cagttactacacagagtggggaaattgaaatgagctgacacatgtgtgccagaatcttct 680
Query: 479 gcagattttaaaatctcccactgagaatacacaggaagtattaataatctgacagaagct 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gcagattttaaaatctcccactgagaatacacaggaagtattaataatctgacagaagct 740
Query: 539 gtcagggctcacggggtggtcttatgccaagcaggatcaggaatacttgaaggaaaatac 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gtcagggctcacggggtggtcttatgccaagcaggatcaggaatacttgaaggaaaatac 800
Query: 599 tactacccaagctggagcaaagcctggccatatactttgagtcttg 644
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tactacccaagctggagcaaagcctggccatatactttgagtcttg 846
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 644
Length of database: 1046
Length adjustment: 10
Effective length of query: 634
Effective length of database: 1036
Effective search space: 656824
Effective search space used: 656824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
