Query= MSMg01no524_i05.b1 MSMg01no524_i05.b1 CHROMAT_FILE:
MSMg01no524_i05.b1 PHD_FILE: MSMg01no524_i05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:58:49 2005
(685 letters)
>mm_chr3_151464460_151465550
Length = 1091
Score = 1228 bits (635), Expect = 0.0
Identities = 670/685 (97%), Gaps = 6/685 (0%)
Strand = Plus / Plus
Query: 7 ggaattcttgatggagctgagttcccagatgtgcaagctgatgatgttaactccacagca 66
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 207 ggaattcttgatggagctgagttcccagatatgcaagctgatgatgttaactccacagca 266
Query: 67 acgactggcaagtttatacaggttcctaaggacagccttccgtagcagaatatagaccca 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 acgactggcaagtttatacaggttcctaaggacagccttccgtagcagaatatagaccca 326
Query: 127 ggggtctaagatctgattccacgttgccatgcggagagcaaaaagtgtcgtttcacaggt 186
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 gggatctaagatctgattccacgttgccatgcggagagcaaaaagtgtcgtttcacaggt 386
Query: 187 cactggggaattatttccatttattgcaatgttggccattgttacctagaaaacaagcaa 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 cactggggaattatttccatttattgcaatgttggccattgttacctagaaaacaagcaa 446
Query: 247 aataggaaaagctgttgatcacaaacatttcttcattcccacagtttttcaagttgacaa 306
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 447 aataggaaaagctgttgatcacagacatttcttcattcccacagtttttcaagttgacaa 506
Query: 307 caaatacaacatgacctttgtaccacatctcacaaagtgctgccatgttgcaaaatactg 366
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 caaatataacatgacctttgtaccacatctcacaaagtgctgccatgttgcaaaatactg 566
Query: 367 atggatataaatgcatgatgccataaatcatggatgtaggccatagaatattttaactca 426
||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct: 567 atggatataaatgcatgatgccataaatcatggatgtaggccatagagtattttaattca 626
Query: 427 aattgacatgaagactataaaaatgatattccactgtgaacaaacagaatcaaggagaaa 486
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 627 aattgacatgaagactataaaaatgatattccactgtgaacaaacagactcaaggagaaa 686
Query: 487 caaacatggataccaacaactagcctcacacttctgggagtaagaattttaaa------a 540
||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 687 caaacatggataccaacaactagcctcacacttctgggagtaagaattttaaagcgaata 746
Query: 541 cacattagtttattcaatagaaaatgaaagcatatttaagcaaataaattattcataagc 600
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 747 cacattagtttattcaatagaaaataaaagcatatttaagcaaataaattattcataagc 806
Query: 601 ttgtaagtacttttaaacaatgaacttttccaggcactataatacatgcattctaaagat 660
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 807 ttgtaagtacttttaaacaatgaacttttccaggcactgtaatacatgcattctaaagat 866
Query: 661 gggagcaaaaggatcatgtcttcat 685
|||||||||||||||||||||||||
Sbjct: 867 gggagcaaaaggatcatgtcttcat 891
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 685
Length of database: 1091
Length adjustment: 10
Effective length of query: 675
Effective length of database: 1081
Effective search space: 729675
Effective search space used: 729675
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no524_i05.g1 MSMg01no524_i05.g1 CHROMAT_FILE:
MSMg01no524_i05.g1 PHD_FILE: MSMg01no524_i05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:58:49 2005
(359 letters)
>mm_chr3_151662384_151663142
Length = 759
Score = 534 bits (276), Expect = e-156
Identities = 291/296 (98%), Gaps = 2/296 (0%)
Strand = Plus / Minus
Query: 1 cttgtctttatagatttccaaatgggcaggaaggttccatactatgtggtctagctttca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 cttgtctttatagatttccaaatgggcaggaaggttccatactatgtggtctagctttca 423
Query: 61 tgttaggagacacagaggcaggaaaacagaagataagtataattcaaggttgttttgggc 120
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tgttaggagacacagaagcaggaaaacagaagataagtataattcaaggttgttttgggc 363
Query: 121 tctagctgtgtgtgtatgtgtgtgtgcacatgccagagctgcaaatagaagagggagggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tctagctgtgtgtgtatgtgtgtgtgcacatgccagagctgcaaatagaagagggagggc 303
Query: 181 aacaagggtgtagcatgtattgctctatagttctctttctagggaggggctagagtagat 240
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 302 aacaagggtgtagcatgtattgctctacagttctctttctagggaggggctagagtagat 243
Query: 241 gggagatg-gcctgaagttttgagttttgggcagagatagcggggagagagagaga 295
|||||||| | |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 242 gggagatgag-ctgaagttttgagttttgggcagagatagcggagagagagagaga 188
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 48
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 359
Length of database: 759
Length adjustment: 9
Effective length of query: 350
Effective length of database: 750
Effective search space: 262500
Effective search space used: 262500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
