TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CTCACCTGAGGAATACTGAATGGCTGAGAAGCACCTGAAAAAATGTTCAA
CATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGATTCTAC
CTCACACCAGTCAGAATGACTAAGATCAAAAATTCAGGTGACAGCAGATG
CTGGTGAGGATGTGGAAAAAGAGGAACACTCTTCCATTGTTGGTGGGATT
GCAAGCTTGTACAACCATTCTGGCAATCAGTCTGGCAGTTCCTCAGAAAA
TTAGACATAGTACTACTGGAGGATCCCTCAATACCTCTCCTGGGCATATA
TCCAGAATATGTTCCAACTGGTAAGAAGGACACATGCTCCACTATGTTCA
TAGCAGCCTTATTTATAATAGCCAGAAGTTGGAAAGAACCCAGATGCCCC
TCAACAGAGGAATGGATACAGAAAATGTGGTACATTTACACAATGTAGTA
CTACTCAGCTATTAAAAAAAATGAATTTATGAAATTTCTAGGCAAATGGA
TGGACCTGTAGGGCATCATCCTTAGTGAGGTAACCCAATCACAAAAGAAC
TCACACAATATGTACTCACTGATAAGTGGATATTAGCCCAGAAACTTAGA
ATACCCAAGATATAAGATACAATTTGATAAACACATGAAAGTNCAGAAGA
AGGAAGACCAAAGTGTGGACACTTTGCCCCTTCTTAGAAATGCAACAAAA
CACCCATGGGAGGACT

ACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXCAGGCCTGAGTCACTATGCTCAACTTATATC
CTATAATTCTTATCTGCTATAAAATGGTCAGTCTTGAAAACATAAATACA
GGTAACACTATATAGACCGAGAAGGTTATATTTAGGAATATATTTATCTG
TACATGCCTATACATATGTTCATGTAATAACAATTAATGACAAAGGAAGG
CATAAATTTGAAAAGAGGGAAAGGAGGATTATGTGAAAGGGTTTGAAGGG
AGGAAATGGAAGGTGAAATGATATGGTTTTGTTACAATCTTAAGAAGAAA
AGAAATAATCAAAAGTGTTAGAATAAATAATACTATCAATATTTTCTGAA
AAAGTTAAAAAAAAAAAACTTATAACTTTTTCTTGTTCCAATCTTTTTGG
GCAGCAGTACTAAGGAAAATCCGGGACAGAGTTTTGTTCACATCTGTGCC
AGAGAAATCCAGAGGTTGTAGCCATTTGTGGGGCAGGTTGGTGGTGGAGG
AATGGCAGTGAATAGTTCCTGGAGGGTGGGATGAGCATCTTCATCTGAGG
AGTTACTTTGTCCTGCCTGAAGCCACTGGGATGCCTAATAGGAGAGATAA
CGACCATAACAGGCTCCAGGTATGAGGCCTGGTGGTGGGGCACAAAACCT
GTGGCTTGAGCACACAGACTATAGCATGAAAATCACACCTTTGTTGTTAT
CTTGCAGGCCT

Query= MSMg01no524_l24.g1 MSMg01no524_l24.g1 CHROMAT_FILE:
MSMg01no524_l24.g1 PHD_FILE: MSMg01no524_l24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:59:07 2005
         (607 letters)



>mm_chr3_109519302_109520309
          Length = 1008

 Score = 1106 bits (572), Expect = 0.0
 Identities = 599/608 (98%), Gaps = 1/608 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   caggcctgagtcactatgctcaacttatatcctataattcttatctgctataaaatggtc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caggcctgagtcactatgctcaacttatatcctataattcttatctgctataaaatggtc 260

                                                                       
Query: 61  agtcttgaaaacataaatacaggtaacactatatagaccgagaaggttatatttaggaat 120
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 261 agtcttgaaaacataaatacaggtaacactatatagaccgagcaggttatatttaggaat 320

                                                                       
Query: 121 atatttatctgtacatgcctatacatatgttcatgtaataacaattaatgacaaaggaag 180
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 321 atatttatctgtacatgcctatacatatattcatgtaataacaattaatgacaaaggaag 380

                                                                       
Query: 181 gcataaatttgaaaagagggaaaggaggattatgtgaaagggtttgaagggaggaaatgg 240
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 381 gcataaatttgaaaagagggaaaggaggattatgtgaaaaggtttgaagggaggaaatgg 440

                                                                       
Query: 241 aaggtgaaatgatatggttttgttacaatcttaagaagaaaagaaataatcaaaagtgtt 300
           |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 441 aaggtgaaatgatatggttttgctataatcttaagaagaaaagaaataatcaaaagtgtt 500

                                                                       
Query: 301 agaataaataatactatcaatattttctgaaaaagttaaaaaaaaaaaa-cttataactt 359
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 501 agaataaataatactatcaatattttctgaaaaagttaaaaaaaaaaaaacttataactt 560

                                                                       
Query: 360 tttcttgttccaatctttttgggcagcagtactaaggaaaatccgggacagagttttgtt 419
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tttcttgttccaatcttttttggcagcagtactaaggaaaatccgggacagagttttgtt 620

                                                                       
Query: 420 cacatctgtgccagagaaatccagaggttgtagccatttgtggggcaggttggtggtgga 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cacatctgtgccagagaaatccagaggttgtagccatttgtggggcaggttggtggtgga 680

                                                                       
Query: 480 ggaatggcagtgaatagttcctggagggtgggatgagcatcttcatctgaggagttactt 539
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ggaatgacagtgaatagttcctggagggtgggatgagcatcttcatctgaggagttactt 740

                                                                       
Query: 540 tgtcctgcctgaagccactgggatgcctaataggagagataacgaccataacaggctcca 599
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 741 tgtcctgcctgaagccactgggatgcctaataggagagataacgaccataacaggctcta 800

                   
Query: 600 ggtatgag 607
           ||||||||
Sbjct: 801 ggtatgag 808


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 607
Length of database: 1008
Length adjustment: 10
Effective length of query: 597
Effective length of database: 998
Effective search space:   595806
Effective search space used:   595806
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)