XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCAGTAT
ATCAATGGTATCTACTAAGAATCCTATCATTTGATTTCATGCTATTTTCT
TCTCGCTGTCTTTCTAGGTCTCTGTAGCAGATTCTAAATGTGAAAGGCAG
TAGAGAGTTAATAATACAAGCACCTTGCTTGTTCTTGGGAGTATTAAGTG
ATGGAGTAATTCTAAAATATTCATTTTGGGCTCCTAGTTCTATCACCATT
ATACATTTCAATACGATATATATCTATACCATCTTACTATATACAAAGAA
TGATATGGAGAGAGTACTCTTTATTTTGTTTGTTTTGTTTTTAATTTTTC
TTTTGTTTTTGTCTTTTTTTTTAATTGCAGCTGCCATTTATCCTGATTTT
CCTAAAACTGTGCAAATGCTGTGCATGAAAGTAATTGTGTAAAATGATGG
GTGTCTAGATGGGGAGGAAGCAAAGGGTTGTGCTCAATTTTAACCACCCT
CCCTGCCTGTCTGCTGCTATCATGAAAGAAAGTCAGGATGCTGAGCTCCT
GTACCCATGGCTACCCAGTCTTCCTTTATCATACACAAAGTGTTACAGTT
ATATTTGAATACCAAGTACCCACATAGTTAATTTTGTGATAAATATATTA
GACTGATAGTCTTCCAATGTTATCTCAAGGGAAGAAAACAAGATGTTTAT
TCTATATTTGAGTTGCCATTACAGATTATAGATTATAAGTAATGATTAGG
CAATA

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXAGCATTTCTCATTCTAGTTCTAAAACTGTATATCCA
ATTGTTCTTTAAACACCTCTGTTTGGCCCCCAAGAGTGCTCAAAACCCAT
ATTTTATAACCTCAGAGCTAATAAGGAATTCACCTATAAAAAGGTAGAAA
GTGTTTTCTCTTAAAACAAGGAAAAAACAACTATACCATCTTTATTTCTG
TTCAACATATAGAATGCAATAATGGAATGATGATAATGTTTAAAGATATT
TTGCAAATTTTGAGACAATATTTTAGATAAGGTCAACTTTGTGTCTCACA
TATTTTAAAAAGACAGTTCCTAAAATGCTCTATTTGTAGACTTAGGGAAA
GGCGCACATGTTTCCAACCTAGACAAAGAATTATAGGAAACACATGTCTT
ACCAAGAGGGAATATCTGAAGAAAGGCCAATGGAAGATTGTAGTGAGGAC
AGACTGAAAAGCAGTGGGAATCCTAGCATATTTGATACACAGTGATCAGA
ATGTGACTACAAGGAATGACAGAAGCTGTGGATAGAACTTCCTACACTTG
GAAGATGAACTGATGCTCTGGAGGGCAAAGCATGAGAAGTACAGTTGCCT
GGCATTCTGGAGACCAGGAGATCCAGAGTTGCAAATGTTACATATTAAGC
CATTACACTGTTGGATTTTGGGTTTATGATGATTATAACTATGGCATTT

Query= MSMg01no525_n14.g1 MSMg01no525_n14.g1 CHROMAT_FILE:
MSMg01no525_n14.g1 PHD_FILE: MSMg01no525_n14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:00:36 2005
         (685 letters)



>mm_chr3_45637227_45638311
          Length = 1085

 Score = 1286 bits (665), Expect = 0.0
 Identities = 680/685 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   agcatttctcattctagttctaaaactgtatatccaattgttctttaaacacctctgttt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 201 agcatttctcattctagttctaaaactgtatatccaattgttctttaaacacctctgttc 260

                                                                       
Query: 61  ggcccccaagagtgctcaaaacccatattttataacctcagagctaataaggaattcacc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggcccccaagagtgctcaaaacccatattttataacctcagagctaataaggaattcacc 320

                                                                       
Query: 121 tataaaaaggtagaaagtgttttctcttaaaacaaggaaaaaacaactataccatcttta 180
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 321 tataaaaaggtagaaagtgttttctcttaaaacaaggaaaaaacaactatgccatcttta 380

                                                                       
Query: 181 tttctgttcaacatatagaatgcaataatggaatgatgataatgtttaaagatattttgc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttctgttcaacatatagaatgcaataatggaatgatgataatgtttaaagatattttgc 440

                                                                       
Query: 241 aaattttgagacaatattttagataaggtcaactttgtgtctcacatattttaaaaagac 300
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 441 aaattttgagacaatattttagataaggtcaactttgtgtctcacgtattttaaaaagac 500

                                                                       
Query: 301 agttcctaaaatgctctatttgtagacttagggaaaggcgcacatgtttccaacctagac 360
           ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||
Sbjct: 501 agttcctaaaatgctctatttgtagacttagagaaaggcacacatgtttccaacctagac 560

                                                                       
Query: 361 aaagaattataggaaacacatgtcttaccaagagggaatatctgaagaaaggccaatgga 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaagaattataggaaacacatgtcttaccaagagggaatatctgaagaaaggccaatgga 620

                                                                       
Query: 421 agattgtagtgaggacagactgaaaagcagtgggaatcctagcatatttgatacacagtg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agattgtagtgaggacagactgaaaagcagtgggaatcctagcatatttgatacacagtg 680

                                                                       
Query: 481 atcagaatgtgactacaaggaatgacagaagctgtggatagaacttcctacacttggaag 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atcagaatgtgactacaaggaatgacagaagctgtggatagaacttcctacacttggaag 740

                                                                       
Query: 541 atgaactgatgctctggagggcaaagcatgagaagtacagttgcctggcattctggagac 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 atgaactgatgctctggagggcaaagcatgagaagtacagttgcctggcattctggagac 800

                                                                       
Query: 601 caggagatccagagttgcaaatgttacatattaagccattacactgttggattttgggtt 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 caggagatccagagttgcaaatgttacatattaagccattacactgttggattttgggtt 860

                                    
Query: 661 tatgatgattataactatggcattt 685
           |||||||||||||||||||||||||
Sbjct: 861 tatgatgattataactatggcattt 885


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 685
Length of database: 1085
Length adjustment: 10
Effective length of query: 675
Effective length of database: 1075
Effective search space:   725625
Effective search space used:   725625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)