Query= MSMg01no526_a23.b1 MSMg01no526_a23.b1 CHROMAT_FILE:
MSMg01no526_a23.b1 PHD_FILE: MSMg01no526_a23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:00:52 2005
(564 letters)
>mm_chr3_142604138_142605101
Length = 964
Score = 1040 bits (538), Expect = 0.0
Identities = 555/561 (98%), Gaps = 2/561 (0%)
Strand = Plus / Minus
Query: 5 gaattcagtcatgatatacttagggagagttttattttgctttgttttggttttgtccga 64
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 764 gaattcagtcatgatataattagggagagttttattttgctttgttttggttttgtccga 705
Query: 65 gtcaagtccatgaactgtagctaacactggctatcttcaaagcgttccaggggaagttgg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 gtcaagtccatgaactgtagctaacactggctatcttcaaagcgttccaggggaagttgg 645
Query: 125 cagcttatacacacatgcaataagagagaacaaggaatatgacaggcatgggaggagagc 184
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 644 cagcttatacacacatgcaataagagagaacaaggaatatgacaggcacgggaggagagc 585
Query: 185 cagtgtgcctgggacctagcagggaggcatttctactgtcttggaggcttgtgtgatatt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 cagtgtgcctgggacctagcagggaggcatttctactgtcttggaggcttgtgtgatatt 525
Query: 245 cttgtaagagtgtttccatactttcaaagagatgtttctaatgagctacttgggatgagg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 cttgtaagagtgtttccatactttcaaagagatgtttctaatgagctacttgggatgagg 465
Query: 305 acctcaagggacatgttcaaactaaaaatgatggttattgagcaagaactacattcagaa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 acctcaagggacatgttcaaactaaaaatgatggttattgagcaagaactacattcagaa 405
Query: 365 acaaaagaacactttgttttcttgagccctttcatggagttgggtagagccaaattgctc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 acaaaagaacactttgttttcttgagccctttcatggagttgggtagagccaaattgctc 345
Query: 425 agtataagaaagagatgaatatgcagagcctggggtgggaggaagggtggattcaggaaa 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 agtataagaaagagatgaatatgcagagcctggggtgggaggaagggtggattcaggaaa 285
Query: 485 agtattcgtggggagttggggcg-ggggggatgaagacaaatgcaatcatccctggagca 543
||||||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||
Sbjct: 284 agtattcgtggggagatgggg-gtggggggatgaagacaaatgcaatcatccctggagca 226
Query: 544 ccacggctaanaagggacaac 564
|||||||||| ||||||||||
Sbjct: 225 ccacggctaaaaagggacaac 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 564
Length of database: 964
Length adjustment: 10
Effective length of query: 554
Effective length of database: 954
Effective search space: 528516
Effective search space used: 528516
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no526_a23.g1 MSMg01no526_a23.g1 CHROMAT_FILE:
MSMg01no526_a23.g1 PHD_FILE: MSMg01no526_a23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:00:52 2005
(476 letters)
>mm_chr3_142537855_142538730
Length = 876
Score = 909 bits (470), Expect = 0.0
Identities = 473/474 (99%)
Strand = Plus / Plus
Query: 1 aatagacaagtttttagggaataaaatgacaaaacacaaactactattacaagcagcaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatagacaagtttttagggaataaaatgacaaaacacaaactactattacaagcagcaag 260
Query: 61 taagctacaagtaaggataatttcagacataattcttatgcactagtctaggctccttag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taagctacaagtaaggataatttcagacataattcttatgcactagtctaggctccttag 320
Query: 121 ggagactgtctcagaaataacttcttactagagaacacggtaagtgtcttttaaacccaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggagactgtctcagaaataacttcttactagagaacacggtaagtgtcttttaaacccaa 380
Query: 181 gaactgggtttaagaaggaatttcttagaattataataaaggaaaattggacaaatttaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaactgggtttaagaaggaatttcttagaattataataaaggaaaattggacaaatttaa 440
Query: 241 ctttgttaaaaattaataatttttaccatcaaaggacaccacaacaatcagaaaaattgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctttgttaaaaattaataatttttaccatcaaaggacaccacaacaatcagaaaaattgc 500
Query: 301 agttaggattctaggtttgcaaatattagtaaattgtgataatgaataacatgttttttg 360
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 501 agttaggattctaggtttgcaaatattagtaaattgtgataatgaataacatattttttg 560
Query: 361 ttttattcaatattaaatctgaccaactcagaagtaaactgttaagttatgtgagtatgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttttattcaatattaaatctgaccaactcagaagtaaactgttaagttatgtgagtatgt 620
Query: 421 gaataactgactcaaaattatatacttcaggtatactgtccactaaacataaga 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gaataactgactcaaaattatatacttcaggtatactgtccactaaacataaga 674
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 476
Length of database: 876
Length adjustment: 10
Effective length of query: 466
Effective length of database: 866
Effective search space: 403556
Effective search space used: 403556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
