TTTTTTTTCTTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCTCAGTGGAGGAATATCGAATGGCTGAGAAGCACCTGAAG
AAATATTCAACATCCTTAGTCATCAGGGAAATGGAAATCAAAACTACCCT
GAGGTTTCACCTCATACCAGTCAGAATGGCTAAGATCAAAAACTCAGGTG
ACAGCAGATGCTGAGGTGGAATTGCAAGCTGGTACAACTACTGGAAATCA
GTGTGGAGTTTCCTCTGAGAATTGGAAATATTTCTACCTGAGAACCCAGC
TATACCATTCCTGGGCATATACACAAAAAATGCTCCAACATCTAACAAGG
ACACATGCTCCACTATGTTCATAGCAGTCTTATTTATAAAACCAGAAGCT
AGAAACAACCCAGATGTCCCTCAACAGAGGAATGGATACAGAAAATGAGG
TACATTTACCCGATGGAGTACTATTCAGGTATTGAAAACAATGAATCTAT
GAAATTTTTAGGTAAATGGATGGAACTTGAAAAATATCATCCTGAGTGAG
AAAACCCAGTCACAAAGAAACACACATGGCATGCACTCATTGGTAAGTGT
ATATTATCCTAAAAGCTTGGAATACCCAAGATACAATTCATAAACAACAG
GAAGCTCAAGAATAGGGAAGACCAAAGTGTGGATACTTTGAACCTTCTTA
GAAGGGGTATCAAAATATCCATGGGAGGAGATACAGAGACN

NTAAATTCCAATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCATGTGATGAGGAAAT
GGAAGCATAAAGATCAAGTGGTATCCAGAAAGTTTATATCCAGGAGAAAA
TCGCCAACCTGGAGAGAGAAGGTCTGCATAATTTCCACCAGAGAGCTGGA
CACTGGGAGAAAAAGGCTGACACGTGGGTTAAGACACAGAGCTTATAGAA
GCAGAAAATTTTATATAAGCATAAACCCCAGCCTTCTACTACTAAGTGGA
ACAGGTTACCAGGTGATTTGATACAGCTTTAATACCTGGGAAATGGGGCA
ATAATACCTGCCTTATAGACTTCATAGAGACACTGAGACTTTAAATGCAA
TTAGCATGTAAATGTGTCTCAGAATTGGTAAGAGTTTGTTACTAATGGGA
TCTTTAATATCTTGCATCTCTTTGGAATTGCCCTATAAATTTCTAATTTT
ATTTGATATAATAGATTCTTATCGCTTCTTGCTTCTTAGTCTAGAATTTA
TTCTGCAATTTAGTCTTTAAGTTTTAAAATTTTTCATTATATCCTACAAT
TCTATAATCTCAACCACTCATTCAAAATAATCAAGAGCTTATTAAATAGC
TTAATAATCAATAGCTTATTAAAAGACTTCTCACAATTTAAGAGTGTTTA
TATATGTGTGTGCAAATGTGTTCAGGTATGTGGGTTCATATGTTGCACAT
GCN

Query= MSMg01no527_j05.g1 MSMg01no527_j05.g1 CHROMAT_FILE:
MSMg01no527_j05.g1 PHD_FILE: MSMg01no527_j05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:02:51 2005
         (623 letters)



>mm_chr3_26618324_26619346
          Length = 1023

 Score = 1181 bits (611), Expect = 0.0
 Identities = 620/623 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   catgtgatgaggaaatggaagcataaagatcaagtggtatccagaaagtttatatccagg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catgtgatgaggaaatggaagcataaagatcaagtggtatccagaaagtttatatccagg 260

                                                                       
Query: 61  agaaaatcgccaacctggagagagaaggtctgcataatttccaccagagagctggacact 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agaaaatcgccaacctggagagagaaggtctgcataatttccaccagagagctggacact 320

                                                                       
Query: 121 gggagaaaaaggctgacacgtgggttaagacacagagcttatagaagcagaaaattttat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gggagaaaaaggctgacacgtgggttaagacacagagcttatagaagcagaaaattttat 380

                                                                       
Query: 181 ataagcataaaccccagccttctactactaagtggaacaggttaccaggtgatttgatac 240
           ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 381 ataagcataaatcccagccttctactactaagtggagcaggttaccaggtgatttgatac 440

                                                                       
Query: 241 agctttaatacctgggaaatggggcaataatacctgccttatagacttcatagagacact 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agctttaatacctgggaaatggggcaataatacctgccttatagacttcatagagacact 500

                                                                       
Query: 301 gagactttaaatgcaattagcatgtaaatgtgtctcagaattggtaagagtttgttacta 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gagactttaaatgcaattagcatgtaaatgtgtctcagaattggtaagagtttgttacta 560

                                                                       
Query: 361 atgggatctttaatatcttgcatctctttggaattgccctataaatttctaattttattt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atgggatctttaatatcttgcatctctttggaattgccctataaatttctaattttattt 620

                                                                       
Query: 421 gatataatagattcttatcgcttcttgcttcttagtctagaatttattctgcaatttagt 480
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 621 gatataatagattcttatcgcttcttgcatcttagtctagaatttattctgcaatttagt 680

                                                                       
Query: 481 ctttaagttttaaaatttttcattatatcctacaattctataatctcaaccactcattca 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ctttaagttttaaaatttttcattatatcctacaattctataatctcaaccactcattca 740

                                                                       
Query: 541 aaataatcaagagcttattaaatagcttaataatcaatagcttattaaaagacttctcac 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aaataatcaagagcttattaaatagcttaataatcaatagcttattaaaagacttctcac 800

                                  
Query: 601 aatttaagagtgtttatatatgt 623
           |||||||||||||||||||||||
Sbjct: 801 aatttaagagtgtttatatatgt 823


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 623
Length of database: 1023
Length adjustment: 10
Effective length of query: 613
Effective length of database: 1013
Effective search space:   620969
Effective search space used:   620969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)