Query= MSMg01no527_j12.b1 MSMg01no527_j12.b1 CHROMAT_FILE:
MSMg01no527_j12.b1 PHD_FILE: MSMg01no527_j12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:02:53 2005
(592 letters)
>mm_chr3_39682002_39682992
Length = 991
Score = 1079 bits (558), Expect = 0.0
Identities = 581/592 (98%), Gaps = 7/592 (1%)
Strand = Plus / Plus
Query: 4 ggaattcagaatcctctacttcaaatcaacaacaacaaca---cacatattaaacctcat 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 204 ggaattcagaatcctctacttcaaatcaacaacaacaacaacacacatattaaacctcat 263
Query: 61 gggtgatttgtttccaattttaatcacaccaagtcaccaacacatcacatatggacaagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gggtgatttgtttccaattttaatcacaccaagtcaccaacacatcacatatggacaagc 323
Query: 121 aaatggaaagagtgcttgccagtgcctgaggtctgtgtcaatataaatggttggcatgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aaatggaaagagtgcttgccagtgcctgaggtctgtgtcaatataaatggttggcatgat 383
Query: 181 tatttgaagaaggcaggtgtgtggcaaactgtcccaatggataatccaaagaggtcactg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tatttgaagaaggcaggtgtgtggcaaactgtcccaatggataatccaaagaggtcactg 443
Query: 241 ctgtcctagaataaaagctcatatggaatatggttgctgtgaaccacggtttgcaaaggc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ctgtcctagaataaaagctcatatggaatatggttgctgtgaaccacggtttgcaaaggc 503
Query: 301 acacctcttatcaccactcatccttggatttgctaagcaattgccattcttctttataat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 acacctcttatcaccactcatccttggatttgctaagcaattgccattcttctttataat 563
Query: 361 gcgcataaaagccaagtcattaagatggccaaaggattaataaaggctttcctgcaaggt 420
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 564 gcgcataaaagccaagtcattaagctggccaaaggattaataaaggctttcctgcaaggt 623
Query: 421 atttgcagatccccacccagcaaagagctttgtgtaagtgcagccactcacaagtttctc 480
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 atttgcagatcccca----gcaaagagctttgtgtaagtgcagccactcacaagtttctc 679
Query: 481 ctgtcacactcatgtcagatttcccaccactcacatccatttactattcagtgtatgcat 540
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 680 ctgtcacactcatgtcagatttcccaccactcacatccatttactattcagtgtgtgcat 739
Query: 541 gtatatgtatgtatgcttgcatgtgtgggggagagctttcaccttgggggac 592
||||||||||||||||||||||||||||||||| |||||| |||||||||||
Sbjct: 740 gtatatgtatgtatgcttgcatgtgtgggggagggctttcgccttgggggac 791
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 592
Length of database: 991
Length adjustment: 10
Effective length of query: 582
Effective length of database: 981
Effective search space: 570942
Effective search space used: 570942
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no527_j12.g1 MSMg01no527_j12.g1 CHROMAT_FILE:
MSMg01no527_j12.g1 PHD_FILE: MSMg01no527_j12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:02:53 2005
(510 letters)
>mm_chr3_39701731_39702640
Length = 910
Score = 982 bits (508), Expect = 0.0
Identities = 508/508 (100%)
Strand = Plus / Minus
Query: 1 atttacaattatctttttactaagtgaactcttggttttcatttattcagacattgccaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 708 atttacaattatctttttactaagtgaactcttggttttcatttattcagacattgccaa 649
Query: 61 tctctcccttttcttgaagttcaatctcaggtctaattaccactgcacactggcctcacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 tctctcccttttcttgaagttcaatctcaggtctaattaccactgcacactggcctcacc 589
Query: 121 aactccccttcttgaacataattactttgaccattgctataaagatatcattaagcaatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 aactccccttcttgaacataattactttgaccattgctataaagatatcattaagcaatg 529
Query: 181 ttgttctcttctgttacataccatgctgagcttgtgcctaatcctacctcctgtatcttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 ttgttctcttctgttacataccatgctgagcttgtgcctaatcctacctcctgtatcttc 469
Query: 241 tacactatgcactgaagtttttgatctttctgattaaagttcctttccctttctcttgta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 tacactatgcactgaagtttttgatctttctgattaaagttcctttccctttctcttgta 409
Query: 301 gtagacatttcttcataaggaaatttgtgatgtgctgtttgaatgcatccatatttgttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 gtagacatttcttcataaggaaatttgtgatgtgctgtttgaatgcatccatatttgttg 349
Query: 361 catagaaagatgctaaatcaggataagagataaagtgttagtgttattctggtgcctttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 catagaaagatgctaaatcaggataagagataaagtgttagtgttattctggtgcctttg 289
Query: 421 acatgttcatttcttggtcatgtggcaaatttttaacaagagccattttaatattctttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 acatgttcatttcttggtcatgtggcaaatttttaacaagagccattttaatattctttt 229
Query: 481 atattctcaggaccaagggagtgggtgg 508
||||||||||||||||||||||||||||
Sbjct: 228 atattctcaggaccaagggagtgggtgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 510
Length of database: 910
Length adjustment: 10
Effective length of query: 500
Effective length of database: 900
Effective search space: 450000
Effective search space used: 450000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
