NNNAAGANTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXCGCGGAATTCTCACCTGAAGAATACTAAATGGCTGAGAAGCACCTG
AAAAAATGTTCAGCATCCTTAATCATCAGGGAAATGCAAATCAAAACAAC
CCTGAGATTCCCTAGTAAGAGTGGCTAAGATCAAAATTTCAGTTGATAGC
AGATGCTGGAGAAGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTG
GGATTGAGAGCTGGTACAACCACTCTGGAAATCAGTCTGTCAGTTCCTCA
GAAAATTGGACATAGGACTACCGGAGGATCATGCAATACCTCTCCTGGAC
ATATATCCAGATATTCAAACTGGTAATAAGGACACGTGCTCCACTATGTT
CATAGCAGACTTATTTATAATAGCCAGAATCTGGAAAGAACCCAGATGCC
CCTCAACAGAGGAATGATACGGAAAATCTGGTACATTTACACAATGGAGT
ACTACTCAGCTATTAAAAAGAATGAATTTATGAAATCCTAGGCAAATGGT
TGGACCTGGAGGGCATCATTCCTAATGAGATAACCCACTCACAAAAGAAC
TCACATGATATGTACTCACTGATAAGTGGATGTTAGCCCAGAAACTTATA
ATACCCAAGATACAAGTTGCAAAACACATGAAACTCAAGAAGAATGAAGA
CCAAAGTGTGGACAATTTGCCCCTTCTTAGAATTGGGAACAAACACCCAC
TGGAG

NNAATTTTCCCATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTATTTACTTTATT
ATTCAAGTGTGGTTGAAGGTGACTATCCCATGTTAAACATCCATCAAAGT
CAAAGTCACCCCATAATGAGAAGTACACATACAACTTGACAAACATAAAA
CATGGGAGAAAAATATGTCCCTTCCTCTCTATCAGATGGGAATGAAAAAC
AACCAGAAGATGGCGCTCACACACAAGAAAAAAATTCATCACCTCCCCTC
TGGAGAGAAGTGAAAGTAATAAGATCAATGGTAATCTGTGGCTCTCCAAG
GCCATGCCTAGCTTGATTGAAACATAGATCATGGCCTGGTACATGTCTTC
CAGGTACTGAGTGGTCTTGAGCCCAAAACACAAATGCCTTAGACTTGTCT
GACTACAAAATACTTTTTAAGGCCTCTTTTCAGAAAAGAATTACAGAATT
ATTCAAAACAGAATTGTTGATGTATGTCAGAGGCACATAGACAGAGACAG
ACAGGAACGCTTTCCATGTCAGTATTAAGAACCTCTGCCAAGGACTGGCC
TCAGTCGGCCCCTCAATTCCGTGGGAGAATCAGAGTCCCAGTACAGGTGG
GCAGGGAGTCAGTGAAAAGGTGAGAAACAGATGTGAACACAAGGGAGTGG
TGTATCTGAACGTAATTTCTCANNAATAGCNGCAGACTTTACATACNGAA
GTAAAACAGAA

Query= MSMg01no527_m24.g1 MSMg01no527_m24.g1 CHROMAT_FILE:
MSMg01no527_m24.g1 PHD_FILE: MSMg01no527_m24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:03:13 2005
         (545 letters)



>mm_chr3_15986236_15987180
          Length = 945

 Score = 1031 bits (533), Expect = 0.0
 Identities = 542/545 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   tttatttactttattattcaagtgtggttgaaggtgactatcccatgttaaacatccatc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 700 tttatttactttattattcaagtgtggttgaaggtgactatcccatgttaaacatccttc 641

                                                                       
Query: 61  aaagtcaaagtcaccccataatgagaagtacacatacaacttgacaaacataaaacatgg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 aaagtcaaagtcaccccataatgagaagtacacatacaacttgacaaacataaaacatgg 581

                                                                       
Query: 121 gagaaaaatatgtcccttcctctctatcagatgggaatgaaaaacaaccagaagatggcg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 gagaaaaatatgtcccttcctctctatcagatgggaatgaaaaacaaccagaagatggcg 521

                                                                       
Query: 181 ctcacacacaagaaaaaaattcatcacctcccctctggagagaagtgaaagtaataagat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 ctcacacacaagaaaaaaattcatcacctcccctctggagagaagtgaaagtaataagat 461

                                                                       
Query: 241 caatggtaatctgtggctctccaaggccatgcctagcttgattgaaacatagatcatggc 300
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 460 caatggtaatctgtggctctccaaggccatacctagcttgattgaaacatagatcatggc 401

                                                                       
Query: 301 ctggtacatgtcttccaggtactgagtggtcttgagcccaaaacacaaatgccttagact 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 ctggtacatgtcttccaggtactgagtggtcttgagcccaaaacacaaatgccttagact 341

                                                                       
Query: 361 tgtctgactacaaaatactttttaaggcctcttttcagaaaagaattacagaattattca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 tgtctgactacaaaatactttttaaggcctcttttcagaaaagaattacagaattattca 281

                                                                       
Query: 421 aaacagaattgttgatgtatgtcagaggcacatagacagagacagacaggaacgctttcc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 280 aaacagaattgttgatgtatgtcagaggcacatagacagagacagacaggaacactttcc 221

                                                                       
Query: 481 atgtcagtattaagaacctctgccaaggactggcctcagtcggcccctcaattccgtggg 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 atgtcagtattaagaacctctgccaaggactggcctcagtcggcccctcaattccgtggg 161

                
Query: 541 agaat 545
           |||||
Sbjct: 160 agaat 156


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 545
Length of database: 945
Length adjustment: 10
Effective length of query: 535
Effective length of database: 935
Effective search space:   500225
Effective search space used:   500225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)