Query= MSMg01no528_b07.b1 MSMg01no528_b07.b1 CHROMAT_FILE:
MSMg01no528_b07.b1 PHD_FILE: MSMg01no528_b07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:03:35 2005
(683 letters)
>mm_chr3_81668124_81669206
Length = 1083
Score = 1236 bits (639), Expect = 0.0
Identities = 669/679 (98%)
Strand = Plus / Plus
Query: 5 gaattctttcaaattaacattatttagatgctctagtctttatattgtcttcgtagcagc 64
||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||
Sbjct: 205 gaattctttcaaattaacattatttagatactctagtctttatattgtcttcttagcagc 264
Query: 65 tattctgatgcttggctttatgacatcactcacacatttatcctcccttgcccaaatctt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tattctgatgcttggctttatgacatcactcacacatttatcctcccttgcccaaatctt 324
Query: 125 atccaagtcctattaatgttaactcagcactactcttacctgctggtacagtattcctaa 184
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 325 atccaagtcctattaatgttaactcagcgctactcttacctgctggtacagtattcctaa 384
Query: 185 taggcaaatgcactctatatgttaatccaaccctgaccccactcataccacaagcagctg 244
|||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 385 caggcaaatgcactctataagttaatcctaccctgaccccactcataccacaagcagctg 444
Query: 245 ttgccctatgttctgcctagtgaaaattgccatgtatcttatttgcctttttaaggagga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttgccctatgttctgcctagtgaaaattgccatgtatcttatttgcctttttaaggagga 504
Query: 305 taaaggaaggccagatgtccctttgcatgtgatacaatgagccagctgacctctagtttt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 taaaggaaggccagatgtccctttgcatgtgatacaatgagccagctgacctctagtttt 564
Query: 365 catataatcccatttgtctgcacagtggcatccctccagtgtagtgagagtggacaactc 424
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 565 catataatcccatttgtctgctcagtggcatccctccagtgtagtgagagtggacaactc 624
Query: 425 ctaaggatcaactggaaaggatgaaacagacaaggcatgagttcctagaaaatctcatct 484
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 625 ctaaggatcaactggaaaggatgaaagagacaaggcatgagttcctagaaaatctcatct 684
Query: 485 aactcatgcaaaattgtgagcattcctcccctttcttagaccatccctcctctgatttgc 544
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 685 aactcatgcaaaattgtgagcattcctcccctttcttagaccatcactcctctgatttgc 744
Query: 545 tttgaatcgtagcaatgattctctctgtaattttcatatgataaagggttgagaaattga 604
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tttgaatcatagcaatgattctctctgtaattttcatatgataaagggttgagaaattga 804
Query: 605 tgggaaagttatcctcccacgattcctactgtggtccaagaataaaagcctccttcatca 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 tgggaaagttatcctcccacgattcctactgtggtccaagaataaaagcctccttcatca 864
Query: 665 ctcggcccctcaactgatg 683
|||||||||||||||||||
Sbjct: 865 ctcggcccctcaactgatg 883
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 683
Length of database: 1083
Length adjustment: 10
Effective length of query: 673
Effective length of database: 1073
Effective search space: 722129
Effective search space used: 722129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no528_b07.g1 MSMg01no528_b07.g1 CHROMAT_FILE:
MSMg01no528_b07.g1 PHD_FILE: MSMg01no528_b07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:03:35 2005
(648 letters)
>mm_chr3_81811761_81812808
Length = 1048
Score = 1048 bits (542), Expect = 0.0
Identities = 598/618 (96%), Gaps = 4/618 (0%)
Strand = Plus / Minus
Query: 1 ctcctgaaatgaacacagatgtggttttattgattcatactgtattccatttcctaaagt 60
||||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||
Sbjct: 620 ctcctgaaacgaacacagacgtggttttattgattcatactgtattcgatttcctaaagt 561
Query: 61 tagttacaccatattaggcttcaaatctattgtgtgtgagagatttggaaatttgtcgtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tagttacaccatattaggcttcaaatctattgtgtgtgagagatttggaaatttgtcgtc 501
Query: 121 taaaacaccccttttcaggctggatcatatagggtcctgcttctgagtgagtgtaccagt 180
||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||
Sbjct: 500 taaaacaccccttttcaggctggatcatataggctcctgcttctgagtgagtgtactagt 441
Query: 181 gcacctgtgtcagttgctcatgagtgaatccacattgttttccctgatgacctcccttcc 240
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gcacctgtgtcagttgctcctgagtgaatccacattgttttccctgatgacctcccttcc 381
Query: 241 tcttccttctcatctcccaagtgactttcagaaattcctacttgcctgtcctgttttgct 300
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tcttccttctcatctaccaagtgactttcagaaattcctacttgcctgtcctgttttgct 321
Query: 301 acgagtgcattagagaaccactggactctctcttctctctaaacaaagcccagaccttat 360
|| | |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||
Sbjct: 320 acaaatgcattagagaaccactggactctctcttctctctaaataaagcccaggccttat 261
Query: 361 ttaaaattcaaatgtgttcttcaatgattgttgaaattaacactatttctttaactatac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 260 ttaaaattcaaatgtgttcttcaatgattgttgaaattaacactatttctttaacaatac 201
Query: 421 tttt--aaaaagtattatttattttatgtatacgagtacacagttgctatcatcaaacac 478
|||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 200 ttttttaaaaa--attatttattttatgtatatgagtacacagttgctatcatcaaacac 143
Query: 479 accagaagagggcatcagatcccattacagatggctgtgagccactaggtggttgctgag 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 accagaagagggcatcagatcccattacagatggctgtgagccactaggtggttgctgag 83
Query: 539 aattgaactcaggacctctagaggaggagtcagtgctcttaaccactgagccatctctcc 598
||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||
Sbjct: 82 aattgaactcaggacctctagaggaggagtcagcgctcttaaccactgaaccatctctcc 23
Query: 599 aacccaacaacaagtttt 616
||||||||||||| ||||
Sbjct: 22 aacccaacaacaactttt 5
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1048
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1038
Effective search space: 662244
Effective search space used: 662244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
