NCCCCTCTTATATTGGGGCCGCTAAACAACTCACTATATTCAGAGGATCC
GCGGAATTCCTGATCTTTCCAAGTCTTTTATCATGAAGGGGTGTTGGATC
TTTTCAAATACTTTCTCAGCATCTGAGAAAATGATTGTGTGTTTTTTTTT
CTTTGAGTTTGTTTATTTTGTGGATTAATTTGGTGGGTTTCTGTATATTG
AACCATCCTGGCTTCCTTGGGATTAAGCCTACTTACTCACGATGGATGAT
CATTTTGATGTTTTCTTGGACTTGGTTTGCAAAAATTTTATTTAGTATGT
TTGCATCGATATTCATAAGGATAATTGGTCTGAAATTCTTTTTTTGTTGT
TGTTGTTGTTGTTGGATCTTTGTGTGGTTTAGGTATCAGAGTAATTGTGG
CTTCGTAAAACAAATGGGGTGGTGTTCCTTCTGTTTCTATTTTGTGGAAT
AGTTTAAAGATTATTGGTATTAGGTCTTCTTTGAAGGTCTGATAGAACTC
TGCACTAAATCCATCTGGTCCTAGGCTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTTTTTTTTTTTTTGGGGGGGAGACTATTAACGACTGTTTCTAAT
TTTTTAAGGGTTATGGGACTATTTAAAACCTTAATCTGAACCTGAATTAA
CTTTGAAACCTGAAATCTGGCTAAAAAATTATCCATTTCATTCCAAATTT
CCCGTTTTGTTTTGTATGGGTTTTTGTGAAAAGATCTGAAGATTTTTTTA
AA

NCCCCAATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXATCTGGGAAGTGGGGCCTATTGGT
CATTAGAACATGCCTTCTTCTAATACACTCCACATTATTGTTTGACACAG
AGTCTCTCACTGAACCTAGGGATCACCCATTAGCCAGACTGGCTGACTAG
CTAGCCCCAGTAAACCTACTGTTTCTGTCTTCCAGCACTGGGATAATAGG
TACACAACATAGCAAAGCATAGCTTTCTACGTATCCTTGAAATGAGAATG
TAGGTCTTTAGACTTGCATAGCAAGCACTTTGCTTACTCAGCTGAGCCAG
CTGCCAAATCCTATGCTTTCTTAACCATTTCCTATTGATTCCATACTCAT
CAAGGGCAGCTATAGTTACATGATGTGCCATAGGCTTCTCTCTATAGGAT
ATGCTCCTGCATGATACAGACCACAGACCCCTCTGAGTTTCACTGATGTC
ACTGATGAATTACCAGGCACTACTTATCTGGGCATTTGAGACCACTTAAC
ATAGCCTCAGTATTGAATCCAATTAGAAAAATTGTCAGTCAATATAGAAC
ACAACTAATGTGCACCTTGAAGATGACTGCATTCACTACAAATGTCTTCT
TCCAGGTAGCAGAAAAATAAACAAATCCTGGACAGCACAGTAGTGAGGGT
TACTTCATGCTTTTTAAATGGAAAGATGCATTGCTCTTGATATTCTN

Query= MSMg01no528_d11.g1 MSMg01no528_d11.g1 CHROMAT_FILE:
MSMg01no528_d11.g1 PHD_FILE: MSMg01no528_d11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:03:45 2005
         (668 letters)



>mm_chr3_63495147_63496214
          Length = 1068

 Score = 1120 bits (579), Expect = 0.0
 Identities = 582/583 (99%)
 Strand = Plus / Minus

                                                                        
Query: 86   gaacctagggatcacccattagccagactggctgactagctagccccagtaaacctactg 145
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1068 gaacctagggatcacccattagccagactggctgactagctagccccagtaaacctactg 1009

                                                                        
Query: 146  tttctgtcttccagcactgggataataggtacacaacatagcaaagcatagctttctacg 205
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1008 tttctgtcttccagcactgggataataggtacacaacatagcaaagcatagctttctacg 949

                                                                        
Query: 206  tatccttgaaatgagaatgtaggtctttagacttgcatagcaagcactttgcttactcag 265
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 948  tatccttgaaatgagaatgtaggtctttagacttgcatagcaagcactttgcttactcag 889

                                                                        
Query: 266  ctgagccagctgccaaatcctatgctttcttaaccatttcctattgattccatactcatc 325
            ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 888  ctgagccagctgccaaaccctatgctttcttaaccatttcctattgattccatactcatc 829

                                                                        
Query: 326  aagggcagctatagttacatgatgtgccataggcttctctctataggatatgctcctgca 385
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 828  aagggcagctatagttacatgatgtgccataggcttctctctataggatatgctcctgca 769

                                                                        
Query: 386  tgatacagaccacagacccctctgagtttcactgatgtcactgatgaattaccaggcact 445
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 768  tgatacagaccacagacccctctgagtttcactgatgtcactgatgaattaccaggcact 709

                                                                        
Query: 446  acttatctgggcatttgagaccacttaacatagcctcagtattgaatccaattagaaaaa 505
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 708  acttatctgggcatttgagaccacttaacatagcctcagtattgaatccaattagaaaaa 649

                                                                        
Query: 506  ttgtcagtcaatatagaacacaactaatgtgcaccttgaagatgactgcattcactacaa 565
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648  ttgtcagtcaatatagaacacaactaatgtgcaccttgaagatgactgcattcactacaa 589

                                                                        
Query: 566  atgtcttcttccaggtagcagaaaaataaacaaatcctggacagcacagtagtgagggtt 625
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588  atgtcttcttccaggtagcagaaaaataaacaaatcctggacagcacagtagtgagggtt 529

                                                       
Query: 626  acttcatgctttttaaatggaaagatgcattgctcttgatatt 668
            |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528  acttcatgctttttaaatggaaagatgcattgctcttgatatt 486


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 668
Length of database: 1068
Length adjustment: 10
Effective length of query: 658
Effective length of database: 1058
Effective search space:   696164
Effective search space used:   696164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)