NCCCAAAACTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXCGCGGAATTCCTAAATACCTCTGTGCTGCAGTCATTAAATGATACTGT
TTCCTGGTAGTCACCAACCACCTCTGGATCATATACTCTTTCATTCCTTT
CTTCCATAGTGAACCCTCAGAGTTGGAAGGATAAATATGTGATATATGCT
CCATTTAGAGCAGAGTAATCTATGCAGCCTTTTATAATCTGTACATTATT
CAGTCGTGGGCTGCTGTGTAAATCACCATCTACAGCAAATAGAATCTCCT
CAAAAGGGGGTTGAAAGTGATCCATGGGTATAAAGAGAGTTCATTCAGGG
TCATTTTAACACTATGCCTATTTAGCAGCATAATAGTAGTAGGATCTTCC
CTAGAGACTATAACTTACTTACTCATAGGTTCTTGGCCTGATAATGGTGC
CAGATATGGGTTTGGTATTGTGAAGAGAAATTAGCTTTGAATCTTTAGTT
ATGCGTATTTCAACTTGACTTTGTGAATAGGTTGGAGAATTACTAATGTC
CATGGGATTTTTCCAAGGAGAAACAATAGAATGCACTGACATTTTGCTTA
AATGGAAATAATGGAACAAGAAGGGAGTATGGGAGGGAAAAATAACACTA
AAGAATTCTCCAAAAAGTTATATAACCTTATGTTGTAGAAGTGTCCAAAG
ATCTGTATTTTCTTAAAAGCAACAACAACA

TTTTTTTACTATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTGTTTAGCTCTGTACC
CCATTTTTAATGGGGTTATTTGAATTTCTGGTGTCCAGCTTCTTCATTGC
CCTTATTTTCTCAGACTTTGATGTGCTAACACACAATCTTTCTTCAACTG
GCAACTAAATTGAATTATTAAAATTTAACTAAATTATCCAAAAGACACTG
AAGGAAGACTTTTTGTCAGTCATAAAATGTTTTATTTTAAAAATTTAAAT
AAATTTGAAAGGCAACACATGGCAAGGAAACAAATTAACACACAACTTAT
GTCATAATTACACCCCTGAACTGTTTTTTTTTTTTTTTTATGGTATGGTA
CACTAAATCTCAATTTTTTACCTTCATGGCGTTTTTAAAAATAACATTGT
CAACTTAGAACTTAAAAAAGGATCTGTTAATATTATAAAGCTGCTTAAGA
CATTTTCCATTTAGTTTTCTATCGTTTCCCACATTAATGGAACAATCAAC
ATACTAAGTTGGTAGGAAGTATACCAGTACTTAATAAATCACTCCCGCTG
GGGCACAAGTCCCTTCCGCTCGACTCGAGACTCGAGCCCCGGGCTACCTT
GCCAGCAGAGTCTTGCCCAACACCCGCAAGGGCCCACACGGGACTCCCCA
CCGGGACCCTAAGAACTCTGGTGAGTG

Query= MSMg01no528_f19.g1 MSMg01no528_f19.g1 CHROMAT_FILE:
MSMg01no528_f19.g1 PHD_FILE: MSMg01no528_f19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:03:56 2005
         (517 letters)



>mm_chr3_125087907_125088824
          Length = 918

 Score =  909 bits (470), Expect = 0.0
 Identities = 488/494 (98%), Gaps = 2/494 (0%)
 Strand = Plus / Minus

                                                                       
Query: 23  ttttaatggggttatttgaatttctggtgtccagcttcttcattgcccttattttctcag 82
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 918 ttttaatggggttatttgaatttctggtgtccagcttcttcattgcccttattttctcag 859

                                                                       
Query: 83  actttgatgtgctaacacacaatctttcttcaactggcaactaaattgaattattaaaat 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 858 actttgatgtgctaacacacaatctttcttcaactggcaactaaattgaattattaaaat 799

                                                                       
Query: 143 ttaactaaattatccaaaagacactgaaggaagactttttgtcagtcataaaatgtttta 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 ttaactaaattatccaaaagacactgaaggaagactttttgtcagtcataaaatgtttta 739

                                                                       
Query: 203 ttttaaaaatttaaat-aaatttgaaaggcaacacatggcaaggaaacaaattaacacac 261
           |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 738 ttttaaaaatttaaataaaatttgaaaggcaacacatggcaaagaaacaaattaacacac 679

                                                                       
Query: 262 aacttatgtcataattacacccctgaactg-ttttttttttttttttatggtatggtaca 320
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 678 aacttatgtcataattacacccctgaactgtttttttttttttttttatggtatggtaca 619

                                                                       
Query: 321 ctaaatctcaattttttaccttcatggcgtttttaaaaataacattgtcaacttagaact 380
           |||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 618 ctaaatctcaatttcttacattcatggcatttttaaaaataacattgtcaacttagaact 559

                                                                       
Query: 381 taaaaaaggatctgttaatattataaagctgcttaagacattttccatttagttttctat 440
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 taaaaaaggatctgttaatattataaagctgcttaagacattttccatttagttttctat 499

                                                                       
Query: 441 cgtttcccacattaatggaacaatcaacatactaagttggtaggaagtataccagtactt 500
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 cgtttcccacattaatggaacaatcaacatactaagttggtaggaagtataccagtactt 439

                         
Query: 501 aataaatcactccc 514
           ||||||||||||||
Sbjct: 438 aataaatcactccc 425


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 517
Length of database: 918
Length adjustment: 10
Effective length of query: 507
Effective length of database: 908
Effective search space:   460356
Effective search space used:   460356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)