CCGGGGATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXCGCGGAATTCTGTTCATTCCCTAAAAGGTAATCACAATCAACTAGCT
AACCATTTCTATATAATATAGAAGTGGGTTTAACATTCACAGATGAAGGT
AGAGTTTCATATCTATCTACCTTTCCTTATAAGTAACAGCAATAACATTC
TTTATGTGACTGCATGACATAATTTCAAGGCCTGTGGGTTTTTTTTTTTC
ATTTTAAACATAAATAAAACTTATTCTTGCCTGAAGAGACCAGAGCAGTG
AATTTTAGCTTTTTATGCTATTGGACTGGACTATATGGAAAGATTTTTTT
ATACCTTGTTATAGCTTTTCAAACCTTTTATCCAAGAAAGCTCTAGCCTT
ATGTCCCTTTTGTATTTCCTTCTATAGTTATTTTTTTCTTTTTAATTTTA
AACTCAATATTCTGAAATGTTTGCAATTATTTTAATTTCCCCCTTTTCCA
CATTTCCATCTATATGTCCATTAAAGCATGTGCATGTGTACACATGTGCG
CGCGCACACACACACACACACACACACACACACACACACACACACACACT
CACTCACATACACACACATCTATATATGTGCTTTGATTGCTTTCAAGCAA
ATCATTTAATGAATATAAAAGATTGTCTTCTAAATTTCAAGTGAGATTCC
ACATTTGCCATGCTAGTGTGGTTAGAATCACACTGCTGGTC

CTTTTCTCCAATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACCTTCCCTCCAGCACT
GTTTAGCCATCCATTCTTGCACCCATGCACATATACACTGAGGTGCTTCT
TACTTGCCAGCCACCACCTTCACCACAATAGTCGTAATTCATTGCTATCA
CAGCTTTTTGAATGGATGAATTAATTAATATTTATTAATTTTGTCATCAT
AGGCCTCACTGAGGAGACTCTGAGGACCTGAAACTTGGAAACTGGCAATG
GGTGTCACAGAGAGGATAAGAGATAGATGTCAGAGCTGTAGAGATGGCTC
AGTGGTTAAGAGCATTGACTGCTCTTCCAGAGATTCTGAGGTCAATTCCC
AGCAACCACATGGTGGTTCACAGTCATCTGTAATGGGATCTGATGCCTTC
TTCTGGTGTGTTTGAGGACCACTACCGTGTACTCATTCATATGTGTGTGT
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGNGNNNNNNTNTNN
CTTNNNNTTTTTTTNNTTNTTTNTTTTTTTTTTTTTTTTTTTTNTTTTTT
TTTTTTTTTTTCTTTTTTTTTTTTNTTTTTTTTTTTNNTTTTTTTTTTTT
TTTTTTTTTNNTNNNTNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTTTTTTTTTTTTT

Query= MSMg01no531_e22.g1 MSMg01no531_e22.g1 CHROMAT_FILE:
MSMg01no531_e22.g1 PHD_FILE: MSMg01no531_e22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:07:53 2005
         (456 letters)



>mm_chr3_56554278_56555133
          Length = 856

 Score =  841 bits (435), Expect = 0.0
 Identities = 450/455 (98%), Gaps = 2/455 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   accttccctccagcactgtttagccatccattcttgcacccatgcacatatacactgagg 60
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 201 accttccctccagcactgtttagccatccattcttgcatccatgcacatatacactgagg 260

                                                                       
Query: 61  tgcttcttacttgccagccaccaccttcaccacaatagtcgtaattcattgctatcacag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgcttcttacttgccagccaccaccttcaccacaatagtcgtaattcattgctatcacag 320

                                                                       
Query: 121 ctttttgaatggatgaattaattaatatttattaattttgtcatcataggcctcactgag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctttttgaatggatgaattaattaatatttattaattttgtcatcataggcctcactgag 380

                                                                       
Query: 181 gagactctgaggacctgaaacttggaaactggcaatgggtgtcacagagaggataagaga 240
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 381 gagactctgaggacctgaaacttggaaactggcaatgggtgtcacagagaggttaagaga 440

                                                                       
Query: 241 tagatgtcagagctgtagagatggctcagtggttaagagcattgactgctcttccagaga 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tagatgtcagagctgtagagatggctcagtggttaagagcattgactgctcttccagaga 500

                                                                       
Query: 301 ttctgaggtcaattcccagcaaccacatggtggttcacagtcatctgtaatgggatctga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttctgaggtcaattcccagcaaccacatggtggttcacagtcatctgtaatgggatctga 560

                                                                       
Query: 361 tgccttcttctggtgtgtttgaggaccactaccgtgtactc-attcatatgtgtgtgtgt 419
           |||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 561 tgccctcttctggtgtgtttgaggaccactaccgtgta-tccattcatatgtgtgtgtgt 619

                                              
Query: 420 gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 454
           |||||||||||||||||||||||||||||||||||
Sbjct: 620 gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 654


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 79
Number of extensions: 24
Number of successful extensions: 24
Number of sequences better than 10.0: 1
Number of HSP's gapped: 22
Number of HSP's successfully gapped: 1
Length of query: 456
Length of database: 856
Length adjustment: 10
Effective length of query: 446
Effective length of database: 846
Effective search space:   377316
Effective search space used:   377316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)