Query= MSMg01no531_k07.b1 MSMg01no531_k07.b1 CHROMAT_FILE:
MSMg01no531_k07.b1 PHD_FILE: MSMg01no531_k07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:08:20 2005
(464 letters)
>mm_chr3_28280676_28281539
Length = 864
Score = 760 bits (393), Expect = 0.0
Identities = 414/421 (98%)
Strand = Plus / Minus
Query: 1 gttcaatagctcatggctgagaagtcagcaggctataccagactcaagaaaagtgagttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gttcaatagctcatggctgagaagtcagcaggctataccagactcaagaaaagtgagttc 362
Query: 61 ttagccaaataactcctctgtttcaactccattaggatgacacttagccagtcataccta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttagccaaataactcctctgtttcaactccattaggatgacacttagccagtcataccta 302
Query: 121 caaggatactaagccaagtggctgactcattagcattctcttttcaagagaatataagca 180
||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 301 caaggataccaagccaagtggctgactcattagcattctcttttcaagagaacataagca 242
Query: 181 aagatgcttttaaaaaggataatttttaataatgtgtaccagtgtgtaggtatgtacatg 240
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 241 aagatgcttttaaaaaggataatttttaataatgtgtaccagtatgtaggtatgtacatg 182
Query: 241 tgtgtgtagggggtctaaagagatcagaagaaggtgtcagggccccaggaactggagtta 300
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgtgtgtaggggatctaaagagatcagaagaaggtgtcagggccccaggaactggagtta 122
Query: 301 caggtagttgtaaactgcccaatgtgggtactgggatctgatcctcctgacagctgccca 360
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 121 caggtagttgtaaactgcccaatgtgggtactgggacctgatcctcctgacagctgccca 62
Query: 361 atctctccagccccacaaagatccttttaaaagaaaacagaacaccataagatatctaat 420
|| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atttctccaggcccacaaagatccttttaaaagaaaacagaacaccataagatatctaat 2
Query: 421 c 421
|
Sbjct: 1 c 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 464
Length of database: 864
Length adjustment: 10
Effective length of query: 454
Effective length of database: 854
Effective search space: 387716
Effective search space used: 387716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no531_k07.g1 MSMg01no531_k07.g1 CHROMAT_FILE:
MSMg01no531_k07.g1 PHD_FILE: MSMg01no531_k07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:08:20 2005
(459 letters)
>mm_chr3_28080575_28081430
Length = 856
Score = 832 bits (430), Expect = 0.0
Identities = 451/460 (98%), Gaps = 5/460 (1%)
Strand = Plus / Plus
Query: 1 tgctcgggtctcacactccagtaaagaatctactagatggcacagtctgcaattttgaag 60
||||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||||
Sbjct: 201 tgctcaggtctcacactccagtaaagaatccacttgatggcacagtctgcaattttgaag 260
Query: 61 ttttattccagtgaaacatgacttacttactacctctttaaagcaagtatctcttggtgg 120
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 261 ttttattccagtgaaacatgacttact----acctctttaaagcaagtatctcttggtgg 316
Query: 121 ttgctaagaaggtaagagacagaatgtatttgatttgcatattcaagttggtgaataagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 ttgctaagaaggtaagagacagaatgtatttgatttgcatattcaagttggtgaataagt 376
Query: 181 taaggggtgttcaagggcatgttgccagagatctaatctcaagcatgtgtcataggatta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 taaggggtgttcaagggcatgttgccagagatctaatctcaagcatgtgtcataggatta 436
Query: 241 gaatatttttctctccggattcataggtttgtgtgttctttcaccttatacagcagtata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 gaatatttttctctccggattcataggtttgtgtgttctttcaccttatacagcagtata 496
Query: 301 gaaagctattagtatttgaactctagctaattaaaatttggttttagtgacaacaggatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 gaaagctattagtatttgaactctagctaattaaaatttggttttagtgacaacaggatc 556
Query: 361 tggtaaatcaaaattctttcaagtctatatcagcaaggctttcaagcgtttgtgccccag 420
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 557 tggtaaatcaaaattctttcacgtctatatcagcaaggctttcaagcgtttgtgccccag 616
Query: 421 agcttctgtgtagctactatgtgtttaattt-gacaaatc 459
||||||||||||||||||||||||||||||| ||||||||
Sbjct: 617 agcttctgtgtagctactatgtgtttaattttgacaaatc 656
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 459
Length of database: 856
Length adjustment: 10
Effective length of query: 449
Effective length of database: 846
Effective search space: 379854
Effective search space used: 379854
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
