AAACACCACTTACGNTGANGGCCGTCTAAAATCTAACCTGTCGGCTTCCT
TAATAGGAGTGGGCTGGNAGTCTCTCTTCGTTTTCGCGTGCTTTTTTATT
TCTCGCTCCGCGCATTTTTTCCTTATTATTTACCTGTGGAGCACGTTTGA
CCACACGCACATTTATTGAGCGTTGACCATTATGGCGCGGAAACAAAACG
CAGCCGGGGAAGAGCGCGTAGAGGCGGGTGGTCGAGTGCCCGCTGTCGAC
CCCCCTATCTCGTCTTTATTCAACCCCTAACGCCCCTCGTAGCCCCAACG
GGGCCGCAACAGTGTGCTAATATTTACTGNCCCGCTGAATTCCGTGAGAT
GATCTTGCGCCCGCGCCTGTGTGCCGCGGTGTTCTCCCGCGTACTACCCT
CCCGTTTACCCGCGGGCTCCACATCCCTCTTTAATTGGAATTGCACAAAC
GATCTAAGGATAATCGCGCAATTTTATTAATATTAAACCCTCCCAGGACA
TATATAGTTGGCTGGGGTCGGGCTGTGGCGTAAAACGATCCCATGAAGCG
CGCAAAGACAAAATAAGGACACCGTGCCGACATCCCAACAACTTAACGCC
CCCCTGTAAATCTTGGGGGTTACGAGTCCTACTCTTATACTACTCGACGG
GTTTCCTGTGAAGATATTATGCGCCGACTCCAAAACGTATTAACACATGA
CGATTATAACCTTTGGATTGTGACACATATATAGCGACACGTTTTGAAGT
ATTTGTGCGCCACAGTTATACCGGGCCCTTGCGCGGCGACCCCTTTGCTA
GGGATTGTTTTGCACAACGCTGACCTTGTTAACAAATATTAANAACCNAT
TACNNNNCCCGGGGGTTTATTATGTTGTGAGAGTGTGNGGGGGGGGNGAG
TCAATTNTGTCTCACNNNNNNATTNNACTATGANAAAACNNAAAGCCTNT
TNCTGGGGTAATNNTCGTCGNCANCGGTGGAAACCNNNTGNANNTNNANN
NGGNNCTTNCAGNNCNNNCGNAATNNGTNNNCGTTT

GTATTCGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCAGGTGAGTAGGCAGAA
ACTGCTTTGGGTAGCAAAGAGCTAGTGCGAGGTTACAGAATTCTGAAGAG
GAAGTGTTTGGATTCTTTTCCTTTAAACTATGGAAATGGATCTTTCTCAT
CCATCTTCTCTCCTAAGACCAGAGCTTGCCCGTAGTGATGCTTCTTGAAA
GCTAAAAGCAAGGAGAATCGGAGTTCCCAGTGATGCTCTGTAGAAAGGAG
TAAGTATCTACACTCACCAGGTGGTACCAAACTTCCCCAGTCTAGGAAAG
CTCTCCTGAGCGGTAGGAAATCTTAGCTGTGGAATGAAAGCTCTCTCAAG
CCCTTAGGTCCTCATTTACAGACATATGAGGGTTAGGATACTAGACTACC
ATGCTCTTAAAAGTCTCCCTAGACTAAGAATAATTACATGTAGAGTCATG
ACCCAGAGAGTGTCTTTTTTTTCCAGTTTTATCCTATACTTATTTATTTA
TTTATTAATTATTTATTTATTTATATTAGATATTTTCTTTATATGCATTT
CAAATGCTATCCCAAAAGTTCCCTATACCCTCCCCAGGCCCTGCTCCCCT
ACCCACTCACTCCTTCTTCTTGGCCCTGGAATTCCCCTGTACTGGGGCAT
ATAAAGTTTGCAATACCAAGGGGCCTCTCTTTTCAATGATGGCTGACTAG
GCCATC

Query= MSMg01no532_d01.g1 MSMg01no532_d01.g1 CHROMAT_FILE:
MSMg01no532_d01.g1 PHD_FILE: MSMg01no532_d01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:09:03 2005
         (654 letters)



>mm_chr3_146621076_146622129
          Length = 1054

 Score = 1162 bits (601), Expect = 0.0
 Identities = 634/647 (97%), Gaps = 4/647 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   ggtgagtaggcagaaactgctttgggtagcaaagagctagtgcgaggttacagaattctg 64
           ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||
Sbjct: 205 ggtgagtaggcagaaactgctttggttagcaaagagctagtgcgaggttacagaatactg 264

                                                                       
Query: 65  aagaggaagtgtttggattcttttcctttaaactatggaaatggatctttctcatccatc 124
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 265 aagaggaagtgtttggattcttttcctttaaattatggaaatggatctttctcatccatc 324

                                                                       
Query: 125 ttctctcctaagaccagagcttgcccgtagtgatgcttcttgaaagctaaaagcaaggag 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttctctcctaagaccagagcttgcccgtagtgatgcttcttgaaagctaaaagcaaggag 384

                                                                       
Query: 185 aatcggagttcccagtgatgctctgtagaaaggagtaagtatctacactcaccaggtggt 244
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aatcggagttcccagtgatgttctgtagaaaggagtaagtatctacactcaccaggtggt 444

                                                                       
Query: 245 accaaacttccccagtctaggaaagctctcctgagcggtaggaaatcttagctgtggaat 304
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 445 accaaacttccccagtctaggaaagctctcctgagtggtaggaaatcttagctgtggaat 504

                                                                       
Query: 305 gaaagctctctcaagcccttaggtcctcatttacagacatatgagggttaggatactaga 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gaaagctctctcaagcccttaggtcctcatttacagacatatgagggttaggatactaga 564

                                                                       
Query: 365 ctaccatgctcttaaaagtctccctagactaagaataattacatgtagagtcatgaccca 424
           ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct: 565 ctaccatgctcttaaaagtttccctagactaagaataattacatgtagagtcgtgaccca 624

                                                                       
Query: 425 gagagtgtcttttttttccagttttatcctatacttatttatttatttattaattattta 484
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||    ||||
Sbjct: 625 gagagtgtcttttttttccagttttctcctatacttatttatttatttatta----ttta 680

                                                                       
Query: 485 tttatttatattagatattttctttatatgcatttcaaatgctatcccaaaagttcccta 544
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 681 tttatttatattagatattttctttatatacatttcaaatgctatcccaaaagttcccta 740

                                                                       
Query: 545 taccctccccaggccctgctcccctacccactcactccttcttcttggccctggaattcc 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 taccctccccaggccctgctcccctacccactcactccttcttcttggccctggaattcc 800

                                                          
Query: 605 cctgtactggggcatataaagtttgcaataccaaggggcctctcttt 651
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 cctgtactggggcatataaagtttgcaataccaaggggcctctcttt 847


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 654
Length of database: 1054
Length adjustment: 10
Effective length of query: 644
Effective length of database: 1044
Effective search space:   672336
Effective search space used:   672336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)