NNTTTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCTTTGTTTTCTTTGGAGACTCAGTTGTGTCATGCATATTTTTT
TCTGGAACCTGTCTTATGAAAGGATGTTTTGCTGAAGCAGACAAATGAGA
GGAAGTTCTGCTGAGAACAGGTACATGCTGTTTTCTGGAAGCTACCTTAG
GAAAGAGCATCTGATGCTTTGTTGCAATGGATGCTTGAGAGTGCCCAAGA
TGTTTAGGAAGAATATAGATATAACCCCACAGACAGTGAGAGGACACTCT
TGCATTGGTTCACCTTGTAATGCTTTGCTGGTTTTTGCTGATATTTGCTT
GTTTTGATTTTTTAGAGAAAAAGGTGCCAAAAAAATCTCCTCATGGTATC
CTGGCGGTTTCTCCTGGGGACTCGCAGTTGCTACGGATTTGCATTTGGTG
TTTGCAATTGGACTGGGTTGGTGCAGCTGGTTCCTGTTTGGAATCACCCC
TAAAAAACTACTTCTAAACAGGTGCCTATCCCCATTTCCTATTGAACCTT
CTTCTTCCCTACCTTTGTGCAGTGGGCTAGAAGGGAGGTCGAACCCTTAT
TAAAGTAGATTTTGAAAAATATAATCCTACAAAAAATAGCTAAAAATGTG
GATTTTTAAAAATATTTTCAACCTTAAAAAATGATAAATGCTTGAACTGA
TTTGGGACAATAACCTTGCTATGATTGTAACATTTGTGTATGGAAAGTTN

CGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXCTAGAACTCAATCAAATCAACCAAAT
GAAAAACAGAAGTTTGAATGGCATGTGTCCAAAGATAATACAAATGATTG
TTAGGCACTTGAATAAATGCTAAAATCCTTTGAGGAATTCATTAAGAGAA
ATTCATTAAGAAAATTAATTTCTCAAAAATGCTTAAAATTAATTAAGGAT
ATATAAATCAAAACTGAGGTAAAAAACAATGTCTTACCAAACAAAATGAC
AAATAGATGAAAGAAAATACGTGAACTAAGATGACAAAGAATAAGAATAC
GTAAATGCTAGTATTGTACAGTGGTACAAACAGTTTGGAACACATAGTAT
GTCCTCAGATTATTAAATATAGTTTTGCCATATAACACTATTTGTTCTAT
TCTTTTGCCCATACTAGAGAAAAACAAAAATGCATATCATGGAACATTTG
TATCTGAATACAATGTTGTACACTGAATTCAACTGAAAATTTATAAATAT
CAACTAAAGGTAACCAATGAACTAAGAGTGATGAAAAATTAATTAGCCCA
TATTACAGAGTCTTGCAAATAACTGCACTGATTCAGGTTTTTAGAATTTC
CCACTTTAGAACCCCACAAAAGCATTATGTATAAAGATACAACAAGGGAT
TCAGAAGAGGCTAAAATCACATAGATCAATGAAGCTTTTGCTAATGAATG
AATCAGATGCAAGAATTTATGCTG

Query= MSMg01no535_p10.g1 MSMg01no535_p10.g1 CHROMAT_FILE:
MSMg01no535_p10.g1 PHD_FILE: MSMg01no535_p10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:13:56 2005
         (680 letters)



>mm_chr3_147841987_147843066
          Length = 1080

 Score =  853 bits (441), Expect = 0.0
 Identities = 444/445 (99%)
 Strand = Plus / Minus

                                                                        
Query: 236  aaagaaaatacgtgaactaagatgacaaagaataagaatacgtaaatgctagtattgtac 295
            ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1080 aaagaaaatacgtgagctaagatgacaaagaataagaatacgtaaatgctagtattgtac 1021

                                                                        
Query: 296  agtggtacaaacagtttggaacacatagtatgtcctcagattattaaatatagttttgcc 355
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1020 agtggtacaaacagtttggaacacatagtatgtcctcagattattaaatatagttttgcc 961

                                                                        
Query: 356  atataacactatttgttctattcttttgcccatactagagaaaaacaaaaatgcatatca 415
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 960  atataacactatttgttctattcttttgcccatactagagaaaaacaaaaatgcatatca 901

                                                                        
Query: 416  tggaacatttgtatctgaatacaatgttgtacactgaattcaactgaaaatttataaata 475
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 900  tggaacatttgtatctgaatacaatgttgtacactgaattcaactgaaaatttataaata 841

                                                                        
Query: 476  tcaactaaaggtaaccaatgaactaagagtgatgaaaaattaattagcccatattacaga 535
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840  tcaactaaaggtaaccaatgaactaagagtgatgaaaaattaattagcccatattacaga 781

                                                                        
Query: 536  gtcttgcaaataactgcactgattcaggtttttagaatttcccactttagaaccccacaa 595
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780  gtcttgcaaataactgcactgattcaggtttttagaatttcccactttagaaccccacaa 721

                                                                        
Query: 596  aagcattatgtataaagatacaacaagggattcagaagaggctaaaatcacatagatcaa 655
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720  aagcattatgtataaagatacaacaagggattcagaagaggctaaaatcacatagatcaa 661

                                     
Query: 656  tgaagcttttgctaatgaatgaatc 680
            |||||||||||||||||||||||||
Sbjct: 660  tgaagcttttgctaatgaatgaatc 636


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 680
Length of database: 1080
Length adjustment: 10
Effective length of query: 670
Effective length of database: 1070
Effective search space:   716900
Effective search space used:   716900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)