NNNNTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCCTCAAATATTGCTTTTCTCAAATAAGTTATCTCTTCTTTG
TTTCCCTATATGCAAAATGACAGTGATGTTAACTACCTTAAGCTACTATT
TACTTACGTAAATTGTGCATTAATAGCCATGGGAGTTAGAAGACAGTAAC
TGAGGCCTGTACTAATTTGTATCATGTGAGTCAAAAGCACATGAAATATG
CTATCTTCTACCATAACAAATGCAATTAAAAAATATTCTAGTCAGACAGT
GGTGACGCACACCTTAATCTAGCACTCAGGAGGCAGAATCAGGTGGATTT
CTGTGAATTCGAAGCCAGAGTGGTCCACAGAGCTGGTTCCAGGATAGCCA
TTGCCACACAAAGAAATCCTGTCTTGAAAACCAAACCAAACTAAACCAAA
AGCAACCAAAACAAAACAAAGCCATATTCTGATTCTGAACCTTTAAGATG
CTAAGTTCAACATACAGCTCACACAAATCTAGTTGCATTTCTATTATACA
GGAAAGGAAACAATCTGCAAAAAGCCTTGTGTTCTCCACAGGTAATCGTT
AATAACAAAACAAATGACCTGTTATGTTTGCTCTCACCTGGAAGACCTAT
CACCTATCATGCCTATGAGAACACACACAGATCTGGGAGATAAGGTACTA
TCCCAGGAAAACAAGGTTCAACTGGCACTGCCCTAGAAAAACAGATCN

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXTCACCTGAGGAATACCGAATGGCAGAGAAGCACTTGAAAAAATG
TTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGAT
TCCACCTCACACTAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGC
AGATGCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTG
GGAGTGCAGGCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCA
GAAAACTGGACATAGTACTACCGGAGGATCCAGCAATACCTCTCCTGGGC
ATATATCCAGAAGATGCCCCAACAGGTAAGAAGGACACATGCTCCACTAT
GTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCTAGAT
GCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATCTACACAATG
GAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTAGCCAA
ATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACACATTCACAAA
GAAACTCACACAATATGTATTCACTGATAAGTGGATATTAGCCCCAAACC
TAGGATACCCCAGATATAAGATATAATTTGCTAAACACATGAAACTCAAG
GAGAATGAAGACTGAAGTGTGGACACTATGCCCCTCCTTATAT

Query= MSMg01no536_d06.b1 MSMg01no536_d06.b1 CHROMAT_FILE:
MSMg01no536_d06.b1 PHD_FILE: MSMg01no536_d06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:14:14 2005
         (631 letters)



>mm_chr3_66878990_66880020
          Length = 1031

 Score =  839 bits (434), Expect = 0.0
 Identities = 434/434 (100%)
 Strand = Plus / Minus

                                                                        
Query: 198  tgcaattaaaaaatattctagtcagacagtggtgacgcacaccttaatctagcactcagg 257
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1031 tgcaattaaaaaatattctagtcagacagtggtgacgcacaccttaatctagcactcagg 972

                                                                        
Query: 258  aggcagaatcaggtggatttctgtgaattcgaagccagagtggtccacagagctggttcc 317
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 971  aggcagaatcaggtggatttctgtgaattcgaagccagagtggtccacagagctggttcc 912

                                                                        
Query: 318  aggatagccattgccacacaaagaaatcctgtcttgaaaaccaaaccaaactaaaccaaa 377
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 911  aggatagccattgccacacaaagaaatcctgtcttgaaaaccaaaccaaactaaaccaaa 852

                                                                        
Query: 378  agcaaccaaaacaaaacaaagccatattctgattctgaacctttaagatgctaagttcaa 437
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 851  agcaaccaaaacaaaacaaagccatattctgattctgaacctttaagatgctaagttcaa 792

                                                                        
Query: 438  catacagctcacacaaatctagttgcatttctattatacaggaaaggaaacaatctgcaa 497
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791  catacagctcacacaaatctagttgcatttctattatacaggaaaggaaacaatctgcaa 732

                                                                        
Query: 498  aaagccttgtgttctccacaggtaatcgttaataacaaaacaaatgacctgttatgtttg 557
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731  aaagccttgtgttctccacaggtaatcgttaataacaaaacaaatgacctgttatgtttg 672

                                                                        
Query: 558  ctctcacctggaagacctatcacctatcatgcctatgagaacacacacagatctgggaga 617
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671  ctctcacctggaagacctatcacctatcatgcctatgagaacacacacagatctgggaga 612

                          
Query: 618  taaggtactatccc 631
            ||||||||||||||
Sbjct: 611  taaggtactatccc 598


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 631
Length of database: 1031
Length adjustment: 10
Effective length of query: 621
Effective length of database: 1021
Effective search space:   634041
Effective search space used:   634041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)