Query= MSMg01no536_f10.b1 MSMg01no536_f10.b1 CHROMAT_FILE:
MSMg01no536_f10.b1 PHD_FILE: MSMg01no536_f10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:14:25 2005
(500 letters)
>mm_chr3_96461985_96462884
Length = 900
Score = 917 bits (474), Expect = 0.0
Identities = 486/490 (99%)
Strand = Plus / Plus
Query: 11 gaattcttccggatggtaagccgttcttcctatctgcttctctctgaaacattaaccggg 70
|||||||| |||| ||||||||||||||||| ||||||||||||||||||| ||||||||
Sbjct: 211 gaattctttcggagggtaagccgttcttcctttctgcttctctctgaaacactaaccggg 270
Query: 71 ctctggaggcacataaactcatgtgtaaactcagcctccttctgcttgacagaagcaagt 130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 ctctggaggcacataaactcatgtgtaaactcagcctccttctgcttgacagaagcaagt 330
Query: 131 ggttttatctcgctaatcttttttcctgatgtttttgtttgttgttgttttgttttgttt 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 ggttttatctcgctaatcttttttcctgatgtttttgtttgttgttgttttgttttgttt 390
Query: 191 tcgagaccaggtctctttatatagccctggctgttctggagctcactatgtagaccaggc 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 tcgagaccaggtctctttatatagccctggctgttctggagctcactatgtagaccaggc 450
Query: 251 tggccttgatcttatgaagatccatatgtttctgtctcccaagtgctgagattaaaggca 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 tggccttgatcttatgaagatccatatgtttctgtctcccaagtgctgagattaaaggca 510
Query: 311 tgagccaccatgcctgatcttttcatgatttttaaaatgagaacaatgatacctagcttg 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 tgagccaccatgcctgatcttttcatgatttttaaaatgagaacaatgatacctagcttg 570
Query: 371 tggaatcgttctgaggtaacaagatgaggtaacataaggcaagccctaactagaacatag 430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 tggaatcgttctgaggtaacaagatgaggtaacataaggcaagccctaactagaacatag 630
Query: 431 catccacccttgtattttcctctatttagtgcctgtcttagagttttactactgtgaaca 490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 catccacccttgtattttcctctatttagtgcctgtcttagagttttactactgtgaaca 690
Query: 491 gacaccataa 500
||||||||||
Sbjct: 691 gacaccataa 700
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 500
Length of database: 900
Length adjustment: 10
Effective length of query: 490
Effective length of database: 890
Effective search space: 436100
Effective search space used: 436100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no536_f10.g1 MSMg01no536_f10.g1 CHROMAT_FILE:
MSMg01no536_f10.g1 PHD_FILE: MSMg01no536_f10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:14:25 2005
(457 letters)
>mm_chr3_96641062_96641918
Length = 857
Score = 574 bits (297), Expect = e-168
Identities = 324/333 (97%), Gaps = 2/333 (0%)
Strand = Plus / Minus
Query: 1 cctaccctgctcagtttatgctaccaagcaactctgatatttgttcccaccccgcagctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 cctaccctgctcagtttatgctaccaagcaactctgatatttgttcccaccccgcagctg 272
Query: 61 gggagtccttttcttgtatgaactgaccgatggccctgcctcggaaagacaacactgacc 120
|||| |||||||||||||||||||||| ||| |||||||||||||| |||||||||||||
Sbjct: 271 gggactccttttcttgtatgaactgactgatagccctgcctcggaatgacaacactgacc 212
Query: 121 ataatctccggtgtgacctcagagatgggaacttaaaagtggcaactaaaattcagtcgt 180
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 211 ataatctccggtgtgacctcagagatgggatcttaaaagtggcaactaaaattcagtcgt 152
Query: 181 gaggatgagaccaaatctagtagggccgacatccatttttaaaagaaagtgatatgccgt 240
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 151 gaggatgagaccaaatctagtagggccgacgtccatttttaaaagaaagtgatatgccgt 92
Query: 241 ggatgccaccacacagaaaaaaaaaaaaaaacaccatggtgaggacagaacgaggaggta 300
|||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 91 ggatgccaccacacaggaaaaaaaaaaaaa-caccatgg-gaggacagaacgaggaggta 34
Query: 301 gtcatcatgaaagccaaggacggaggcctgaga 333
|||||||||||||||||||||||||||||||||
Sbjct: 33 gtcatcatgaaagccaaggacggaggcctgaga 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 457
Length of database: 857
Length adjustment: 10
Effective length of query: 447
Effective length of database: 847
Effective search space: 378609
Effective search space used: 378609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
