GGAGAGGGAGGGGGGGGCGCGATGCGACTCACTATATTCAGAGGATCCGC
GGAATTCAGGGCTAAATCCGCCTGGCTCCAGGCATTTTTCTTGGGTGATG
TTTAATGAATATTATATTTCACTGGGGCTTATAGCTCTTGATTTCACTTG
TCAAGTGATACCTATAGAGAAAATTATCCATTTAAAAATATTATTCCAAT
TTGGTAGAGTACAGGATTTTGAAGTATGTCATTATGATTCTCTGCATTTT
GTCTGTGTCTGTTGTTATGTTCCATTTTTGATTTTTGATTCTTTTTTCAT
TGATTACTTGTGTTGTTTTCCTGGATTTTATTTTATTGATTACAGCTCTG
AGTTAAATTTTCTTTTATTGTCTACTCCAATTGTGTGTGATTTCTTCTTT
TTGTTCTAGAACTTTCAGCTATGCTGTTAAGTTGATAATATGAAATCACT
CCATTTATTTAAAAAAATATAGACACTTACTGCTATGAATTTGCCTCTTA
GAACAGCTTTCACTCTGTCCAATAAGATTGGGTATGTTGTGTATTCAATT
TTATTTAAATAAAGAAAGTTGTTAATTTGTTTCTGTCTTAATTCATTTTT
TTCATTTTGTAAGAATTTGTTTAGTCTCTGTGAGATTTTAACCTTTCTGT
TTTTCTGTTGGTGTTGATATCAAGCTTTAATCCGTGGGGGTTTGATAGAT
TATAGGGAGTTATTTCAATTTTCTTATATTTATTGAGACTTGCTTTGTGT
TCAAGTAT

CGGCCCATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXACTGGCTATTTAATCTAATAGG
TGATCCTAGTGAGCTCCAGGATCAGTAGAAAGTAATATATATATGACTTT
CAAGGCAAAACTGGTTTACATATTAAGTTACAGGCCAATAAATGCCTCAC
AGTAAGAGCCTATTTCAGAAAAAAAAAAGAAAGAAAGAAGGAAAGGAAAG
GAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAG
GAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAG
GAAAATGAGGAAACAGCTGACTGCCACATGCTTAAACTCACATATGTACA
ACATATGTACATGCCAGAGCAAACAAATATGCACACTCATGTGAATATAA
ATCCACAAAGACACACATAAAAAGAGAAAAATTAATTAAATCAAATCACT
TACACATTAAGAAAAAAGTGAAGAATGACTTTCTCAGCAGTATTTTAAAC
TCCACAAAGTTTACATCAAAAGAAACCAAGAAATGCCAGCAAATCAACAG
GTTAGCAGAATGGAAAGAGCTAAGGGAGGGAGTGTCTGGGTTTGAAGTTC
TCTCTAGCCCTATGCTGAGCCACACAGTTACTTCTTCCATGTCTTTGTGT
TAAATTGTAAGATACAGGAATATTTGTCCTTACCTCTAAGTACTTCCTAA
AACCACCC

Query= MSMg01no537_i02.g1 MSMg01no537_i02.g1 CHROMAT_FILE:
MSMg01no537_i02.g1 PHD_FILE: MSMg01no537_i02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:15:53 2005
         (593 letters)



>mm_chr3_59678112_59679104
          Length = 993

 Score =  828 bits (428), Expect = 0.0
 Identities = 513/584 (87%), Gaps = 67/584 (11%)
 Strand = Plus / Minus

                                                                       
Query: 10  ttaatctaataggtgatcctagtgagctccaggatcagtagaaagtaatatatatatgac 69
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 993 ttaatctaataggtgatcctagtgagctccaggatcagtagaaagtaatatatatgtgac 934

                                                                       
Query: 70  tttcaaggcaaaactggtttacatattaagttacaggccaataaatgcctcacagtaaga 129
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 933 tttcaaggcaaaactggtttacatattaagttacaggccaataaatgcctcacagtaaga 874

                                                                       
Query: 130 gcctatttcagaaaaaaaaaagaaagaaagaaggaaaggaaaggaaaggaaaggaaagga 189
           ||||||||||||||||||||| |||||||                               
Sbjct: 873 gcctatttcagaaaaaaaaaa-aaagaaa------------------------------- 846

                                                                       
Query: 190 aaggaaaggaaaggaaaggaaaggaaaggaaaggaaaggaaaggaaaggaaaggaaagga 249
                                            |||||  ||||||||||||||||||||
Sbjct: 845 ---------------------------------gaaag--aaggaaaggaaaggaaagga 821

                                                                       
Query: 250 aaggaaaggaaaggaaaggaaaggaaaatgaggaaacagctgactgccacatgcttaaac 309
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 820 aaggaaaggaaaggaaaggaaaggaaaatgaggaaacagctgactgccacatgcttaaac 761

                                                                       
Query: 310 tcacatatgtacaacatatgtacatgccagagcaaacaaatatgcacactcatgtgaata 369
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 760 acacatatgtacaacatatgtacatgccagagcaaacaaatatgcacactcatgtgaata 701

                                                                       
Query: 370 taaatccacaaagacacacataaaaagagaaaaattaattaaatcaaatcacttacacat 429
           |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 700 taaatccacaaagacacacaaaaaaagagaaaaattaattaaatcaaatcactcacacat 641

                                                                       
Query: 430 taagaaaaaagtgaagaatgactttctcagcagtattttaaactccacaaagtttacatc 489
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 taagaaaaaagtgaagaatgactttctcagcagtattttaaactccacaaagtttacatc 581

                                                                       
Query: 490 aaaagaaaccaagaaatgccagcaaatcaacaggttagcagaatggaaagagctaaggga 549
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 aaaagaaaccaagaaatgccagcaaatcaacaggttagcagaatggaaagagctaaggga 521

                                                       
Query: 550 gggagtgtctgggtttgaagttctctctagccctatgctgagcc 593
           ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 gggagtgtctgggtttgaagttctctctagccctatgctgagcc 477


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 69
Number of extensions: 23
Number of successful extensions: 22
Number of sequences better than 10.0: 1
Number of HSP's gapped: 17
Number of HSP's successfully gapped: 1
Length of query: 593
Length of database: 993
Length adjustment: 10
Effective length of query: 583
Effective length of database: 983
Effective search space:   573089
Effective search space used:   573089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)