GGGGTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCCAAGCTCAGGGTCGGCTTCAAGGATTTTCTAGGAACCATG
GGAACACTGGCAGAGGCTTAGCTATATGTCAAAAATCAATCCTTAAAGGC
ACTTATAATAAAACAATACTGAAAGAGAGCACACCAGACTAACGTGGGGA
CAGGATTTGAGTATAGGGGCTATTGGAATGCCAAGGTTCCAGGAAGCTGT
TTCCATGAAACTCTTCACCTTGTGACTGCTTTCAGGCCCTTAGACCTACC
AAACAGACTGCACTGAAGTGGACATAGCATTCTCCCCCTTTCTTTTATTA
TTTTTCAGCTGGAAGTTCCAGAGTGTCCCTCTTCGTTGTAGCTACAGATC
TCAGAAGAACTCTAAAGACGAGTGGAAACAAAATGATTACTAATAAAATA
ATGCCAATAATAACAGCAAGCAGGATTATATATTGAACCCAATCCAAGGT
ATTCAATGCACTTAGGTTATTTTTTAAATCTCTTGCCAATTCATCAATGT
TCCAAGTGTCCAAATGACTTCTGCTACTGCTAATATCTGAAATTTCTGCC
TTTCTAGCATTAATATTTCCTATATCCTGCCCTATTGCTAAAACTACTTC
TAAAGCATTAGCCTTTTGCCTCCAATTTTTTATCTATAATGTGCAGTTCT
GACAAAGCTATGGAAATATTCCTGTGCATATCATTAACAAAATGAGTGAT
ATGCAG

NATCGATGCAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTATTTGCTCCATGGTTTTTACTTTG
TTTTGTCAGCAGTTGTTAGTTTGTTGGGGATTCCACTGTGTTTATACTGC
TTGCAATAAACTGAGATACTGCAGTGTGGTTTGGTGTCCTCTCTCAGTTT
GCACCAAATCACATTCAGTCTCTTCCAGCACAGCAACAGTCCTCCTCCAG
AGCAACCCCTCTCCCCAACCAGTTCTCTCTTGTGCTCATGAGAGTTACCT
GGATACACTGGAGATCAGGGCAGGAAAACATCTCTCAGGCTTTGTTGCCT
TTGACATTTATATTTTTCTCTGATACCGTTGACATAAGTATTATTGGCAT
GTCCTCATGCTTTCATGTTTATGCTTCTACATAAACTTATTAAGAAATAA
AATGTGATGTCAGAAGCCAGACAGATAAAAGCTTTTTAACGATTTCTTTC
CTCCTGATTATAATTCTGTTTTTGAATATTTGAGGGTAAGCAGAGCTAAC
CTGACTGGATGGGAGTGAAAATAAGGTCAATTGAACTCCATGTGAATTCT
TTGCCCTTCAGAGGAGAGAAGGTAAAAAGAATATGCAAAAGTAATCTAAT
ATTTTAAGTAATGGGTTGATGCTTCCAGGATGCACATGCATGGTTGATCC
TTTCAACTGCTTTGCAGCCTTCTTAACCTTCCTATATCCATGATCCATAC
CCTTTTAG

Query= MSMg01no537_k05.g1 MSMg01no537_k05.g1 CHROMAT_FILE:
MSMg01no537_k05.g1 PHD_FILE: MSMg01no537_k05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:16:03 2005
         (683 letters)



>mm_chr3_59440341_59441423
          Length = 1083

 Score = 1266 bits (655), Expect = 0.0
 Identities = 676/683 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   tatttgctccatggtttttactttgttttgtcagcagttgttagtttgttggggattcca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 883 tatttgctccatggtttttactttgttttgtcagcagttgttagtttgttggggattcct 824

                                                                       
Query: 61  ctgtgtttatactgcttgcaataaactgagatactgcagtgtggtttggtgtcctctctc 120
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 823 ctgtgtttatactgcttgcagtaaactgagatactgcagtgtggtttggtgtcctctctc 764

                                                                       
Query: 121 agtttgcaccaaatcacattcagtctcttccagcacagcaacagtcctcctccagagcaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 763 agtttgcaccaaatcacattcagtctcttccagcacagcaacagtcctcctccagagcaa 704

                                                                       
Query: 181 cccctctccccaaccagttctctcttgtgctcatgagagttacctggatacactggagat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 cccctctccccaaccagttctctcttgtgctcatgagagttacctggatacactggagat 644

                                                                       
Query: 241 cagggcaggaaaacatctctcaggctttgttgcctttgacatttatatttttctctgata 300
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 643 cagggcaggaaaacatctctcaggctttgttgcctttgaaatttatatttttctctgata 584

                                                                       
Query: 301 ccgttgacataagtattattggcatgtcctcatgctttcatgtttatgcttctacataaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 ccgttgacataagtattattggcatgtcctcatgctttcatgtttatgcttctacataaa 524

                                                                       
Query: 361 cttattaagaaataaaatgtgatgtcagaagccagacagataaaagctttttaacgattt 420
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 cttattaagaaataaaatatgatgtcagaagccagacagataaaagctttttaacgattt 464

                                                                       
Query: 421 ctttcctcctgattataattctgtttttgaatatttgagggtaagcagagctaacctgac 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 ctttcctcctgattataattctgtttttgaatatttgagggtaagcagagctaacctgac 404

                                                                       
Query: 481 tggatgggagtgaaaataaggtcaattgaactccatgtgaattctttgcccttcagagga 540
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 tggatgggagtgagaataaggtcaattgaactccatgtgaattctttgcccttcagagga 344

                                                                       
Query: 541 gagaaggtaaaaagaatatgcaaaagtaatctaatattttaagtaatgggttgatgcttc 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 gagaaggtaaaaagaatatgcaaaagtaatctaatattttaagtaatgggttgatgcttc 284

                                                                       
Query: 601 caggatgcacatgcatggttgatcctttcaactgctttgcagccttcttaaccttcctat 660
           ||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 283 caggatgcacatgcacggttgatcctttcaactggtttgcagccttcttaaccttcctat 224

                                  
Query: 661 atccatgatccatacccttttag 683
           |||||||||||||||||||||||
Sbjct: 223 atccatgatccatacccttttag 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 683
Length of database: 1083
Length adjustment: 10
Effective length of query: 673
Effective length of database: 1073
Effective search space:   722129
Effective search space used:   722129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)