Query= MSMg01no538_f18.b1 MSMg01no538_f18.b1 CHROMAT_FILE:
MSMg01no538_f18.b1 PHD_FILE: MSMg01no538_f18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:16:59 2005
(599 letters)
>mm_chr3_150619303_150620301
Length = 999
Score = 1106 bits (572), Expect = 0.0
Identities = 587/592 (99%)
Strand = Plus / Plus
Query: 4 ggaattcatgaactaggtaaaaactgggtttaggaaaactaagtcattgtaatggtgtaa 63
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaactcatgaactaggtaaaaactgggtttaggaaaactaagtcattgtaatggtgtaa 263
Query: 64 tgactaaagaatatgaatttaagtgacatttttaacagtactgcagctagagttccataa 123
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 264 tgactaaagaatatgaatttaagtgacatttttaacagtactgcagttagagttccataa 323
Query: 124 aattgcttattcaattaatttaatccaaggcaccaatgcacaagagtctgttctccaaag 183
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 324 aattgcttattcaattaatttaatccaaggcaccaatgcagaagagtctgttctccaaag 383
Query: 184 tctataaaaatacaatatcctgcttgggactatataataaacatgcttaaaataattgaa 243
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 384 tctataaaaatacaatatcctgcttgggactatataatgaacatgcttaaaataattgaa 443
Query: 244 caattctgaaaaatcaagttagcagtagtcttccatgctgcaactgtcttaccatgacag 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 caattctgaaaaatcaagttagcagtagtcttccatgctgcaactgtcttaccatgacag 503
Query: 304 ctcttaggaggctgagccgcatgtgcatttaggcatagctacacagctgctttacattgg 363
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 atcttaggaggctgagccgcatgtgcatttaggcatagctacacagctgctttacattgg 563
Query: 364 aaatatttgtatgcatcaaataatgaactgtgtgacagtttttacattcacctcagatgt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 aaatatttgtatgcatcaaataatgaactgtgtgacagtttttacattcacctcagatgt 623
Query: 424 ttgagatgttgttaataaaagtaccataaatatactctagaaggaaacagaaatctgtag 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ttgagatgttgttaataaaagtaccataaatatactctagaaggaaacagaaatctgtag 683
Query: 484 tcatatgcctgcctgacatgtgtaaggttgtgggttcaaatcccagtactacaaaacaaa 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tcatatgcctgcctgacatgtgtaaggttgtgggttcaaatcccagtactacaaaacaaa 743
Query: 544 acaaagctaaacaaaacaaaacaaaacaacagaacaagaaaacagaacaaaa 595
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 acaaagctaaacaaaacaaaacaaaacaacagaacaagaaaacagaacaaaa 795
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 599
Length of database: 999
Length adjustment: 10
Effective length of query: 589
Effective length of database: 989
Effective search space: 582521
Effective search space used: 582521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no538_f18.g1 MSMg01no538_f18.g1 CHROMAT_FILE:
MSMg01no538_f18.g1 PHD_FILE: MSMg01no538_f18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:16:59 2005
(633 letters)
>mm_chr3_150745723_150746755
Length = 1033
Score = 909 bits (470), Expect = 0.0
Identities = 488/494 (98%), Gaps = 1/494 (0%)
Strand = Plus / Minus
Query: 1 agaatatttttttcaaacgataaaattattctgtatgactttatactgacaaacaacaga 60
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 agaatatttttttcaaacaataaaattattctgtatgactttatactgacaaacaacaga 434
Query: 61 tatacatttaaaaacaaaaggtagacaatatctactgtgagctcgattgttaagtatgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 tatacatttaaaaacaaaaggtagacaatatctactgtgagctcgattgttaagtatgcc 374
Query: 121 attcatgataacgtttttcctgtgaaggctcataagctgtgagaaattatctgttttcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 attcatgataacgtttttcctgtgaaggctcataagctgtgagaaattatctgttttcct 314
Query: 181 ggagttggtggattatagggtgtcaaattcaagtcctctctttgctttatctgccagggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 ggagttggtggattatagggtgtcaaattcaagtcctctctttgctttatctgccagggt 254
Query: 241 ttctgaaaacattagatggcagcttccaaactactggccttataataaaggagtctgtgt 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 ttctgaaaacattagatggcagcttccaaactactggccttataataaaggagtctgtgc 194
Query: 301 ttgcctctcatttttgctgtgaacataaaattgatctaaaaattaagtattttacctaaa 360
||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 193 ttgtctctcaattttgctgtgaacataaaattgatctaaaaattaagtattttacct-aa 135
Query: 361 aagaattacctaaaatagtccactattaggaacaatattggcatacagaaatcataaatc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 aagaattacctaaaatagtccactattaggaacaatattggcatacagaaatcataaatc 75
Query: 421 cttctagaactttggctggcttaaatacttcaacattttattaaatattaaagtatcatt 480
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 cttttagaactttggctggcttaaatacttcaacattttattaaatattaaagtatcatt 15
Query: 481 tattatgaggatat 494
||||||||||||||
Sbjct: 14 tattatgaggatat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 633
Length of database: 1033
Length adjustment: 10
Effective length of query: 623
Effective length of database: 1023
Effective search space: 637329
Effective search space used: 637329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
