CCXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCGAGAGGATGNGNGGAA
TTNTCAGCCTTACGGTAAGGGGCTGGGTAAGGGGCTTTGCAGAGTGTGTG
CTTCTTAGGGCAGAAGCTCTTAGAGATGGAATCAGTGCCCCTACAAAATG
GGTTCAGGAACTCCCAGTCTCTTCCCTTCAAAAAGGGAAGACAATTCCTA
ACTGGACATGTTAATTGATGACACCTTTACCTCAGAGTTTCCAAGCTCCA
GAATTATGTTAATGAACTTTGATTATTAGGTATGTCCCAATATTGATTTG
TAATGAGTAGAGGGGGATCTCTAAGCACAACAAAAGCTGAGTAATAAGAA
GATTTGAAGGTTTAATTTCTAAGTACCTTTTCTAATAATTTGTGGAAATT
ACCTAGTAAAACATCAAGGAGGAGTTAGATGTGTGGATCATATTCAAAAG
TCTCTGGCCATATCCCACTGCTCTCTTGATACTTAATTTTTGTTAATAGG
CTAAGGATTATCTCTCTTTAAATAAACAAATATGTCAGTGTGTGTGCTTA
TGTTCACACAGTACTATAGATGACAGAAGAGTACATGGGATGTTCCATTA
CTCAAGTTATAGATGATTGTGAGATGCTGTGTAGGTGCTGAAAACTGAAC
CTGGGGTATTTAAGAACATCAAATGCCCTTCCCTAGTGAGACATCTCTCT
AGCCCCTTTTGACATTTCTTATCTGGGAAATGTCTCTAGGACAGTTATAT
AAAAGAATGAAGTCATTTGTATGCTTTAGAT

NGGCATTGCTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTTTGTTCAGCTCTGAGCCCCATTT
TTTAATGGGGTTATTTGATTTTCTGGAGTCCACCTTCTTGAGTTCTTTAT
ATATATTGGATATTAGTCCCCTATCCAATTTGGGATAGGTAAAGATCCTT
TCCCAATCTGTTGGTGGCCTTTTTGTCTTATTGACGGTGTCTTTTGCTTT
GCAGAAGCTTTGCAATTTTATGAGGTCCCATTTATCGATTCTTGATCTTA
CAGCACAAGCCATTGCTGTTTTATTCAGGAATTTTTCCCCTGTACCCATA
TCTTCGAGGCTTTTCCCTACTTTCTCCTCTATAAGTTTCAGTGTCTCTGG
TTTTATGTGGAGTTCCTTAATCCACTTAGATTTGACCTTAGTACAAGGAG
ATAGAAATTTTTTCTTAATTTATTTATTCACTTTACATCCCAATTGAAGC
ACCCACTCTTTCCTTTCCGGACAGTCTCAATCTCATAAACACAACTTCCC
ATTGCTCTCTCCCATTTTTCTCAGAGAAAGGGAAGTCCCCCATGGGTACC
AACCACCTTGAACATCAAGTCAGAGCAGGACTAAGCACATCCTCTCCCAC
TGAGATCAGACAAAGCAGTCCAGTTAGGGGGAAGGAGACCCAAAGACAGG
CAGAGTCAAAGACAGACCCTGCTCCAATTGTTGGTGGACACAC

Query= MSMg01no539_o13.b1 MSMg01no539_o13.b1 CHROMAT_FILE:
MSMg01no539_o13.b1 PHD_FILE: MSMg01no539_o13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:19:01 2005
         (678 letters)



>mm_chr3_158059253_158060330
          Length = 1078

 Score = 1257 bits (650), Expect = 0.0
 Identities = 668/674 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   taaggggctgggtaaggggctttgcagagtgtgtgcttcttagggcagaagctcttagag 60
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taaggggctgggtaagaggctttgcagagtgtgtgcttcttagggcagaagctcttagag 260

                                                                       
Query: 61  atggaatcagtgcccctacaaaatgggttcaggaactcccagtctcttcccttcaaaaag 120
           ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 261 atggaatcagtgcccctacaaaatgggttcaggaactcccagttttttcccttcaaaaag 320

                                                                       
Query: 121 ggaagacaattcctaactggacatgttaattgatgacacctttacctcagagtttccaag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggaagacaattcctaactggacatgttaattgatgacacctttacctcagagtttccaag 380

                                                                       
Query: 181 ctccagaattatgttaatgaactttgattattaggtatgtcccaatattgatttgtaatg 240
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 381 ctccagaattatgttaatgaactttgattattaggtatgtcccaacattgatttgtaatg 440

                                                                       
Query: 241 agtagagggggatctctaagcacaacaaaagctgagtaataagaagatttgaaggtttaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agtagagggggatctctaagcacaacaaaagctgagtaataagaagatttgaaggtttaa 500

                                                                       
Query: 301 tttctaagtaccttttctaataatttgtggaaattacctagtaaaacatcaaggaggagt 360
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 501 tttctaagtaccttttctaataatttgtagaaattacctagtaaaacatcaaggaggagt 560

                                                                       
Query: 361 tagatgtgtggatcatattcaaaagtctctggccatatcccactgctctcttgatactta 420
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tagatgtgtggatcacattcaaaagtctctggccatatcccactgctctcttgatactta 620

                                                                       
Query: 421 atttttgttaataggctaaggattatctctctttaaataaacaaatatgtcagtgtgtgt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atttttgttaataggctaaggattatctctctttaaataaacaaatatgtcagtgtgtgt 680

                                                                       
Query: 481 gcttatgttcacacagtactatagatgacagaagagtacatgggatgttccattactcaa 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gcttatgttcacacagtactatagatgacagaagagtacatgggatgttccattactcaa 740

                                                                       
Query: 541 gttatagatgattgtgagatgctgtgtaggtgctgaaaactgaacctggggtatttaaga 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gttatagatgattgtgagatgctgtgtaggtgctgaaaactgaacctggggtatttaaga 800

                                                                       
Query: 601 acatcaaatgcccttccctagtgagacatctctctagccccttttgacatttcttatctg 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 acatcaaatgcccttccctagtgagacatctctctagccccttttgacatttcttatctg 860

                         
Query: 661 ggaaatgtctctag 674
           ||||||||||||||
Sbjct: 861 ggaaatgtctctag 874


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 678
Length of database: 1078
Length adjustment: 10
Effective length of query: 668
Effective length of database: 1068
Effective search space:   713424
Effective search space used:   713424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)