TTTTTTTCCCTNNNGCGGGNGCCCGGGTCCCCCCCCCCCCCCCCCCCCCT
CCCGCCCTTCCCGCGCCCCCCCCCGCCCCCCCCGGGGGGCCCCGGCCCCC
CCNTGCGGGGGCCCCCCCGCCCCCCCCCCCCCCCCCGGGCGGCCCTCCCC
CCCCCCCCCCCCCCCCCCCGCGCCCCCCNCGCCCGCGCCGGCCCCCCCGC
CCCCCCCCCCGGCCCGCCCGCCCCCCCCCCCCCCCCCCCTTCCCCCTCGC
CCCTTTCCCGGCCCCCCCCCCGTCCCCCCCCCGCTTTNCTTGGGGCCCCC
CCCGCCNCCCCCGCCCCCCCCCCCGGGGGGGGGCGCCCCCCCCCCCCCCC
CCCCTCCGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCGCCC
CCCCCCGGCCCCCGGCCCCCCCCCCGCCCCCCCCGCCTTTCCGGTNTTTC
CGNNNGGGGNNNNNNCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCTC
CCNNNNNNNNNNNNNNNTCTCNTNNNNTNNNGGNNCCCGNGTGGTTNNGN
NTCTTGGNTTNTTGNNNTCCGNGCCGNNNTNGCTTGNNNNNNTCGNNNGN
CCNNTGNTGCNTCCGNCGNNGGCCTGGGCGGNNTGTCCCTNCCGCTTNTT
CCCCGNTCGCTGCGGCCCGTGNCNNCCGTCTTTTGGNCCCCTGNGNGNNG
CTNNNGTNNGCNNNCCNNNNCTTNNNNNNNNGCGNNTGNNNCCGNNTNNN
NNNNNNTNNCCGNGNNNNTNNTGNNNTNNNGNNNTTCCGNNNNNNNTNNN
NNNNNNTCCNNTTTTTTTTNNCCTGNNNNNNTTCCNNNNNNNNTNCNNNN
NNNNNGCTTTTNNTGTGNNNNTCGNCNG

AAAAAACCATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXACATGAAATAAGTAGCCACAG
AAAGCAGGAGAAGGCTAATTGTGTTTTTGAACATTAGATGTTTACTGTAG
GGCAATTCTGGGTTTAAGATGACTTCTGCATATTAACCAGGCAGAGGTAT
ATAGCAGAAGATATGATTCACATGCGAGCTTCAATTAAGGTCATCAAAGA
GTACCAAGGGAATGAACCACTGGGGTAGGAAGGCAATCAGAACTTACTCC
TTAACCAGAAATAATGTTCCTTAATTGACAAATCTTCATTAGTAGCAGAT
GGTAGGTGAACAAGAATTTGGGGGAATGGCCACCTTTTTGACATTACCTC
TAATTAAGAAAGTTTTTCTCAGCTACCAGGGCAAGGTTTGAGACCTTCCT
ATTTTTCCCAGGTCAATAATAATTCAGAGAGGATAATGAAGTCTGTTCCC
CTCTGTCTGTCATTTACTCTAGCTGTTTCCATCTGCTGTAAGGTGAAAAG
ACAAACTGTTCCATGATTTTAGTCTAGACTGAGCATTCAGGAGCCCACAG
TGACTCATGAGTGTGACTTCATACTGGAAAACTGTTATGGTAAAGCACTC
CTAGATACCACGCATACAAGCCTGGAAGAAAGATGATGGTCTCAAATATG
TTCATTATTCTCAGCACAGACGGCATAACAACN

Query= MSMg01no540_f05.g1 MSMg01no540_f05.g1 CHROMAT_FILE:
MSMg01no540_f05.g1 PHD_FILE: MSMg01no540_f05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:19:34 2005
         (598 letters)



>mm_chr3_139396077_139397074
          Length = 998

 Score = 1149 bits (594), Expect = 0.0
 Identities = 597/598 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   acatgaaataagtagccacagaaagcaggagaaggctaattgtgtttttgaacattagat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 acatgaaataagtagccacagaaagcaggagaaggctaattgtgtttttgaacattagat 739

                                                                       
Query: 61  gtttactgtagggcaattctgggtttaagatgacttctgcatattaaccaggcagaggta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 gtttactgtagggcaattctgggtttaagatgacttctgcatattaaccaggcagaggta 679

                                                                       
Query: 121 tatagcagaagatatgattcacatgcgagcttcaattaaggtcatcaaagagtaccaagg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 tatagcagaagatatgattcacatgcgagcttcaattaaggtcatcaaagagtaccaagg 619

                                                                       
Query: 181 gaatgaaccactggggtaggaaggcaatcagaacttactccttaaccagaaataatgttc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 gaatgaaccactggggtaggaaggcaatcagaacttactccttaaccagaaataatgttc 559

                                                                       
Query: 241 cttaattgacaaatcttcattagtagcagatggtaggtgaacaagaatttgggggaatgg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 cttaattgacaaatcttcattagtagcagatggtaggtgaacaagaatttgggggaatgg 499

                                                                       
Query: 301 ccacctttttgacattacctctaattaagaaagtttttctcagctaccagggcaaggttt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 ccacctttttgacattacctctaattaagaaagtttttctcagctaccagggcaaggttt 439

                                                                       
Query: 361 gagaccttcctatttttcccaggtcaataataattcagagaggataatgaagtctgttcc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 438 gagaccttcctatttttcccaggtcaataataattcagagaggataatgaagtctgtccc 379

                                                                       
Query: 421 cctctgtctgtcatttactctagctgtttccatctgctgtaaggtgaaaagacaaactgt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 cctctgtctgtcatttactctagctgtttccatctgctgtaaggtgaaaagacaaactgt 319

                                                                       
Query: 481 tccatgattttagtctagactgagcattcaggagcccacagtgactcatgagtgtgactt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 tccatgattttagtctagactgagcattcaggagcccacagtgactcatgagtgtgactt 259

                                                                     
Query: 541 catactggaaaactgttatggtaaagcactcctagataccacgcatacaagcctggaa 598
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 catactggaaaactgttatggtaaagcactcctagataccacgcatacaagcctggaa 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 598
Length of database: 998
Length adjustment: 10
Effective length of query: 588
Effective length of database: 988
Effective search space:   580944
Effective search space used:   580944
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)