AACCATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCGATCCGCGGA
ATTCTCACCTGAGTGATACCGAATGGCAGAGAAGCACTTGAAAAAATGTT
CAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGATTC
CACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGCAG
ATGCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGGG
AGTGCAGGCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAGA
AAACTGGACATAGTACTACCGGAGGATCCAGCAATACCTCTCCTGGGCAT
ATATCCAGAAGATGCCCCAACAGGTAAGAAGGACACATGCTCCACTATGT
TCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCTAGATGC
CCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATCTACACAATGGA
GTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTAGCCAAAT
GGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACACATTCACAAAGA
AACTCACACAATATGTATTCACTGATAAGTGGATATTAGCCCCAAACCTA
GGATACCCAAGATATAAGATATAATTTGCTAAACACATGANNACTCAGAG
AATGAAGANCTGAGTGTGGACACTATGCCCCTCCTTAGATTTGGG

NCCCATGTAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTTTCCCAAATTGTCACCCAAATGAGG
AATTTTGAAACCTCCCCAAACTTTGATGAAAGTTTTGGGAATTTGAAAAA
CCTAGTGTCCCTATAGATCTCTTGTTTTGTATGAACACATATGTGCTTTA
ATAAGCACTCAGGTGGTACTCCCAGATTCTAAAAATGTCACTGGATGCCT
GTTTCAGAGTTTATGAGTCGGAATTTGAGATAACTGAAAATAGATTTAGG
TTGAGTAAGACAGATTATCTTTAAAAGTCAACATTAGGTTACAAAATAAT
TGGCTAATGGAAATTGTGAAACCAGTCAGAAACTCAAAATAAGCAAAATT
CTAATGGATTTACCACAAGTAACGTAACGTGTTTTGCATCATTTTTTCTT
TGAATAAGTGAAGTTTTTAAAAGTGCTTTTAGGCTCATAAATTTAATTAG
AGATCTCATGTGTTCTCCACAAGTCCTGTTTCCTTTCATCCCACATACAG
CCCATCTGCATGCGAGACACATTTTGCAAAATGAAACACTCAATTATAGA
ACTATTTGCTGGGTGCCAATTTAGTCAATGTTTTACACTGGTGAAGCCAT
CTTTACTTNACACCTCATAAAAAGAAAATCAGCCTCTTAGAAAAAAACAN
GTTTATTGTACACANGGGTCTATGCTCATGAAAGTCTCTTACTATATGAA
AGCAGTCCAAA

Query= MSMg01no540_l22.g1 MSMg01no540_l22.g1 CHROMAT_FILE:
MSMg01no540_l22.g1 PHD_FILE: MSMg01no540_l22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:20:08 2005
         (551 letters)



>mm_chr3_149597535_149598485
          Length = 951

 Score = 1050 bits (543), Expect = 0.0
 Identities = 549/551 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   tttcccaaattgtcacccaaatgaggaattttgaaacctccccaaactttgatgaaagtt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttcccaaattgtcacccaaatgaggaattttgaaacctccccaaactttgatgaaagtt 260

                                                                       
Query: 61  ttgggaatttgaaaaacctagtgtccctatagatctcttgttttgtatgaacacatatgt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgggaatttgaaaaacctagtgtccctatagatctcttgttttgtatgaacacatatgt 320

                                                                       
Query: 121 gctttaataagcactcaggtggtactcccagattctaaaaatgtcactggatgcctgttt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gctttaataagcactcaggtggtactcccagattctaaaaatgtcactggatgcctgttt 380

                                                                       
Query: 181 cagagtttatgagtcggaatttgagataactgaaaatagatttaggttgagtaagacaga 240
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 381 cagagtttatgagtcggaatttgagataaccgaaaatagatttaggttgagtaagacaga 440

                                                                       
Query: 241 ttatctttaaaagtcaacattaggttacaaaataattggctaatggaaattgtgaaacca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttatctttaaaagtcaacattaggttacaaaataattggctaatggaaattgtgaaacca 500

                                                                       
Query: 301 gtcagaaactcaaaataagcaaaattctaatggatttaccacaagtaacgtaacgtgttt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtcagaaactcaaaataagcaaaattctaatggatttaccacaagtaacgtaacgtgttt 560

                                                                       
Query: 361 tgcatcattttttctttgaataagtgaagtttttaaaagtgcttttaggctcataaattt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgcatcattttttctttgaataagtgaagtttttaaaagtgcttttaggctcataaattt 620

                                                                       
Query: 421 aattagagatctcatgtgttctccacaagtcctgtttcctttcatcccacatacagccca 480
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aattagagatttcatgtgttctccacaagtcctgtttcctttcatcccacatacagccca 680

                                                                       
Query: 481 tctgcatgcgagacacattttgcaaaatgaaacactcaattatagaactatttgctgggt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tctgcatgcgagacacattttgcaaaatgaaacactcaattatagaactatttgctgggt 740

                      
Query: 541 gccaatttagt 551
           |||||||||||
Sbjct: 741 gccaatttagt 751


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 551
Length of database: 951
Length adjustment: 10
Effective length of query: 541
Effective length of database: 941
Effective search space:   509081
Effective search space used:   509081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)