Query= MSMg01no542_a10.b1 MSMg01no542_a10.b1 CHROMAT_FILE:
MSMg01no542_a10.b1 PHD_FILE: MSMg01no542_a10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:21:55 2005
(651 letters)
>mm_chr3_41419224_41420274
Length = 1051
Score = 1210 bits (626), Expect = 0.0
Identities = 641/646 (99%), Gaps = 1/646 (0%)
Strand = Plus / Plus
Query: 7 gaattccatcttgctatgcaagttttatcagatgatcaaatgacagatctgatgcatctc 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattccatcttgctatgcaagttttatcagatgatcaaatgacagatctgatgcatctc 266
Query: 67 attgtatgtatgacattttcaaactaagtcttaacttctcaagtacattgtagtagctaa 126
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 atcgtatgtatgacattttcaaactaagtcttaacttctcaagtacattgtagtagctaa 326
Query: 127 ttcaggggaggggaaaggatgacccaggttttagattgactattttttgagctatggagc 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ttcaggggaggggaaaggatgacccaggttttagattgactattttttgagctatggagc 386
Query: 187 tcctttgagactgctgtccagatcagctcgttgctactggtattcgaagattctcaggag 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 tcctttgagactgctgtccagatcagctcgttgctactggtattcgaagattctcaggag 446
Query: 247 tccaagttgtacttttgcttgtagcctaatttaaaaatgagatgttttgcatctgagcaa 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 tccaagttgtacttttgcttgtagcctaatttaaaaatgagatgttttgcatctgagcaa 506
Query: 307 aaacctcttgctggatacaggaaaaggctggactctgatctagttatcttttgattacag 366
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 aaaccttttgctggatacaggaaaaggctggactctgatctagttatcttttgattacag 566
Query: 367 caacagctctgggtgagaatagaatttatagaggaataatctgtgaagccatagaaagaa 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 caacagctctgggtgagaatagaatttatagaggaataatctgtgaagccatagaaagaa 626
Query: 427 accctaaattaatctagtgagtatatggcctctcaccattttaggaggcaccagattcat 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 accctaaattaatctagtgagtatatggcctctcaccattttaggaggcaccagattcat 686
Query: 487 ttgcactattaggaatgctagttttgtgcaaaaataaatgccttacctgtttctccccac 546
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 687 ttgcactattaggaatgctagttttgtgcaaaaataaatgccttacctgtttccccccac 746
Query: 547 atttaggttgaaaagctttcaaatgttccaagttatgctgaaccaaaaacaaataaaaca 606
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 atttaggttgaaaagctttcaaatgttccaagttatgctgaaccaaaaacaaataaaaca 806
Query: 607 aaatgaaaaaaaaaataaaaaa-aataataaaaaatttcccccaca 651
||||||||||||||| |||||| |||||||||||||||||||||||
Sbjct: 807 aaatgaaaaaaaaaaaaaaaaataataataaaaaatttcccccaca 852
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1051
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1041
Effective search space: 667281
Effective search space used: 667281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no542_a10.g1 MSMg01no542_a10.g1 CHROMAT_FILE:
MSMg01no542_a10.g1 PHD_FILE: MSMg01no542_a10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:21:55 2005
(667 letters)
>mm_chr3_41546454_41547519
Length = 1066
Score = 1216 bits (629), Expect = 0.0
Identities = 659/671 (98%), Gaps = 5/671 (0%)
Strand = Plus / Minus
Query: 1 caggcaagcacttcataaccaagctatctcaggccctgagcatatttaaagaaactttat 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 807 caggcaagcacttcataaccaagctatctcaggccctgagcatatttaaagaaactgtat 748
Query: 61 ttcaatgcataaaaatataatcaattaaaagcctcaaaagccaatgataaacttcaagtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 ttcaatgcataaaaatataatcaattaaaagcctcaaaagccaatgataaacttcaagtg 688
Query: 121 agcattttttttattgctaatgtcttttgcccccaatattttgtgtatgttttatgtttc 180
|||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 agca-tttttttatcgctaatgtcttttgcccccaatattttgtgtatgttttatgtttc 629
Query: 181 aagctttacagctcaaatactcataatatcacttcgtaaaactgtgaacggtagtttatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 aagctttacagctcaaatactcataatatcacttcgtaaaactgtgaacggtagtttatg 569
Query: 241 ccccagtacaaatttcattttatttttgcagaattttatctttccttaaatccgaagaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 ccccagtacaaatttcattttatttttgcagaattttatctttccttaaatccgaagaaa 509
Query: 301 catctctgaaatacctgctagatttgcaggctatcctggatcctgaccaggtgccttttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 508 catctctgaaatacctgctagatttgcaggctatcctggatcctgaccaggtgccttctt 449
Query: 361 gaagccacagggttaaatattggacaatagttctcttttctaggcacaagaaccagtttc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 gaagccacagggttaaatattggacaatagttctcttttctaggcacaagaaccagtttc 389
Query: 421 agacctaggagcgacagctctaaactggggggcggggtggggggaccttgagtcacctca 480
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 388 agacctaggagcgacagctctaaactggggggcggggtgaggggaccttgagtcacctca 329
Query: 481 gcccgaggactcacagacctctctgcacagacgcccacagactcttagtgtctgcaaaac 540
|||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||
Sbjct: 328 gcccgaggactcacagacctctctgcacagactcccacagacgcttagtgtctgcaaaac 269
Query: 541 caagactcgggggtgggcaatgaaaatccctacctagttagtgcctgctcctatcacagt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 caagactcgggggtgggcaatgaaaatccctacctagttagtgcctgctcctatcacagt 209
Query: 601 tttcatacaaaaaaaaa----ttaattaaattaaaaatgcgccacactacctcagacaga 656
|| |||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 208 ttccatacaaaaaaaaaaaaattaattaaattaaaaatgcgccacactacctcagacaga 149
Query: 657 cactcgctgcg 667
|||||||||||
Sbjct: 148 cactcgctgcg 138
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 667
Length of database: 1066
Length adjustment: 10
Effective length of query: 657
Effective length of database: 1056
Effective search space: 693792
Effective search space used: 693792
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
