AACTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCATCAGAATGGAGGGGCAGTCCAGTCTACCTGAGCCTTTCATTG
GCATAAGCAACCCTGCTCTACCTTAAGCCCAGAGAAAAAGGAGTCTAAGC
CTTAAACCTCTAACCTCTGAGGTACCACACTGTGGACTCTGGAATCAGAG
TCTTGAATTTTATCATATGCCTGTCACCAGCTGTGAGACCAAGTCTGCAG
TCTTGCAGACCCAGGAGCTTGTGCCAGCCAGGTTTTGGTGGTTTTGGGTG
GTTTCATTGTTGTTGATTTGTCAATTTGACAGAATCTAGGGTTGTCTGGA
AGAAGGAATCATCTTAACAGAGAAAAAAATGGCTCCACAGGATAGCCCTG
TGGGTAAGCCTGTTGGGTGTTTTCTTGTTTGATTTGTTCTTGATATGGAA
ATGCCCGGCCCACTGAGGACAGGGCTGCCCCTGGGGAGGAAAACAAGCTA
AGCAAGCCCGTAGCACTATACCTGCATGGCCCCTGCATCAGTCCCTGCCT
CAAGCCCACCCTGACTTCCCTGGATGATGGATGACATTCTGGGAGAGGAA
ATAAACTCTTTCCTCTCTGTATTGCTTTTGATCCTGGTGTTCATCACAGC
AATAGAAAACAAAGAAAGATGGTCCCTCTCTGCAAGAAACTGTTTATCCT
GCTTTAGAGCTGATGGAATTCTAGGCTAGTGAGATTGTGGGTCTGTAGAT
CACTTCTGG

CGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCTGAG
AAGCACCTGAAAAAAAAAATGTTCAGCATCCGTCATCACCAGGGAAATGT
AAATCAAAACAACCCTGAGATTCCAACTCACACCAGTTAGAATGGTTAAG
ATAAAATATTCAGGTGACAGCAGATGCTGGCGAGGATGTGGAGAAAGAGG
AACACTCCTCCATTGTTGGTGGGATTGCAGGCTTGTACAACCACTCTGGA
AATCCGTCTGGCAGTTCCTCAGAAAATTGGACATAGTACTACCGGAGGAT
CCAGCAATACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACTGGTAA
AAAGGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCA
GAAGCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAA
ATGTGGTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGA
ATTTATGAAATTCCTAGCCAAATGAATGGACCTGGAGGGCATCATCCTGA
GTGAGGTAACACATTCACAAAGGAACTCACACAATATGTACTCACTGATA
AGTGGATATTAGCCCAAAACCTAGGATACCCAAGATATAAGATACAATTT
CCTAAACACATGAAACTCAAGAAAAATGAAGACTGAAGTGTGGACACTAT
ACCCCTCCTCAGA

Query= MSMg01no542_i17.b1 MSMg01no542_i17.b1 CHROMAT_FILE:
MSMg01no542_i17.b1 PHD_FILE: MSMg01no542_i17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:22:37 2005
         (712 letters)



>mm_chr3_56554007_56555118
          Length = 1112

 Score =  903 bits (467), Expect = 0.0
 Identities = 470/471 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcatcagaatggaggggcagtccagtctacctgagcctttcattggcataagcaac 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 gaattcatcagaatggaggggcagtccagtctacctgagcctttcattggcataagcaac 412

                                                                       
Query: 65  cctgctctaccttaagcccagagaaaaaggagtctaagccttaaacctctaacctctgag 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 cctgctctaccttaagcccagagaaaaaggagtctaagccttaaacctctaacctctgag 352

                                                                       
Query: 125 gtaccacactgtggactctggaatcagagtcttgaattttatcatatgcctgtcaccagc 184
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 351 gtaccacactgtggactctggaatcagagttttgaattttatcatatgcctgtcaccagc 292

                                                                       
Query: 185 tgtgagaccaagtctgcagtcttgcagacccaggagcttgtgccagccaggttttggtgg 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 tgtgagaccaagtctgcagtcttgcagacccaggagcttgtgccagccaggttttggtgg 232

                                                                       
Query: 245 ttttgggtggtttcattgttgttgatttgtcaatttgacagaatctagggttgtctggaa 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 ttttgggtggtttcattgttgttgatttgtcaatttgacagaatctagggttgtctggaa 172

                                                                       
Query: 305 gaaggaatcatcttaacagagaaaaaaatggctccacaggatagccctgtgggtaagcct 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 gaaggaatcatcttaacagagaaaaaaatggctccacaggatagccctgtgggtaagcct 112

                                                                       
Query: 365 gttgggtgttttcttgtttgatttgttcttgatatggaaatgcccggcccactgaggaca 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 gttgggtgttttcttgtttgatttgttcttgatatggaaatgcccggcccactgaggaca 52

                                                              
Query: 425 gggctgcccctggggaggaaaacaagctaagcaagcccgtagcactatacc 475
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51  gggctgcccctggggaggaaaacaagctaagcaagcccgtagcactatacc 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 712
Length of database: 1112
Length adjustment: 10
Effective length of query: 702
Effective length of database: 1102
Effective search space:   773604
Effective search space used:   773604
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)