ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCCAGGATCCGCGGAATT
CAGCCTTACTTCACAAAAGGATTAGTAACTGTATAGAAGATTCAAACAGA
CAGATGGATGAATTAATGAAACCTAAAACTTCAACAGGGCAGTCTCCAAA
GTGAATATACNNATAAACTGGNAAAAAATAAAATTGAAGGGTCCAATTAA
ATAATTCCGAAAGACCTGACCCCTAAAACCCATNNTAATCTATAGTTACA
ANNAAACCGGACTATGAGTATGNTNGTGATCAATGTCCCCCCCNGGATGA
CTGCATCAAAATTTACAAACACCAAATCTTTAAACNNNNNNNNNNGGGGG
NNTTNNCCCCTTAACAAACCAAAAACTAATCTGGGGNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNCCCCCACCCAATTCTCCCGNNNNNNNTNN
NNGGCTGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
GGGGGGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGTGGGGGGGGGG
GGGGGGGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGGGGTNNNN
NNNNNNNNNNNNNNNNNNNNNNNNTTTCTCTAAANNNNNNNNNNNNNNNN
NANNAAAANNANAGAGGGAGATTGGGGGGGGGGGGGGGGGAAAGGGGGGG
GGGGGGGGGGGGGGGGGGGGGTATTNNNNNNNTNTCTTTTTGNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTNNNNNNNNTNNNNTTN
NNTTTTGTGGTTATTNG

CCATGCTAGTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTAGGCTCGTGGCTACCTCCAGGGGCCG
GTCTCTCCCTCCTCACAGCCCTTCAACAACCTGTTCAGAGCCTGAGGCGT
CTCTTGCCTCCGATAGGAATCTTGGCTGCAGACGACCTCTTGCTTTTAGC
TGTGCTGAGTTATTTCCCAGCCTGCCTCCACTGGCAGTCAGCAAGTTTGG
CTGGTGCTACTAGATACCGCGTACAGTCTGCTCACTAACTCCGCAGCATA
TGCTTTAGTATTAATTGCTTGTCGCTTAAAACACACACATTTTCACTCTA
GAACCAGTAGAGTACTCTTCAGTGAGTCATGACAACTGAATGCTTCAAGG
TCCCCCCACCAACGGACGTCTTATCAGCCTTGAAACTCCTCCCTCCGGGA
CCCGGACCGGGACCAACACAGGTGTTCCAGCTTCTTCCGCCCCAGCCTTC
CTGTTTACCTAGTTCTGCTCCCCATTGAAGTCCAGGCAAATAGCCAGAGC
TCTCCAGGCAGTGTAACCACCACTCACCAAATTCTTTGCTATCCTTTTCT
GAGGTAGGCTGAGCAAACGAATACTCTCTTCTAATTAGGTTAAGGCCGGT
CTTTNNNTTTTTTTTTTTTTTTTTTTTTTTTNAAAAGGTCTTTGAAAGTC
GCTGAAGCCAAGTGTGATGACGCACACCTGTAATTTTAGTGCTCCGGAGG
GGAGAGGCA

Query= MSMg01no542_n10.g1 MSMg01no542_n10.g1 CHROMAT_FILE:
MSMg01no542_n10.g1 PHD_FILE: MSMg01no542_n10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:23:00 2005
         (608 letters)



>mm_chr3_122323166_122324173
          Length = 1008

 Score = 1108 bits (573), Expect = 0.0
 Identities = 596/605 (98%), Gaps = 3/605 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   taggctcgtggctacctccaggggccggtctctccctcctcacagcccttcaacaacctg 60
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 201 taggctcgtggctacctccagggaccggtctctccctcctcacagcccttcaacaacctg 260

                                                                       
Query: 61  ttcagagcctgaggcgtctcttgcctccgataggaatcttggctgcagacgacctcttgc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttcagagcctgaggcgtctcttgcctccgataggaatcttggctgcagacgacctcttgc 320

                                                                       
Query: 121 ttttagctgtgctgagttatttcccagcctgcctccactggcagtcagcaagtttggctg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttttagctgtgctgagttatttcccagcctgcctccactggcagtcagcaagtttggctg 380

                                                                       
Query: 181 gtgctactagataccgcgtacagtctgctcactaactccgcagcatatgctttagtatta 240
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 381 gtgctactagataccgcgtacagtctgctcactaactccccagcatatgctttagtatta 440

                                                                       
Query: 241 attgcttgtcgcttaaaacacacacattttcactctagaaccagtagagtactcttcagt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 attgcttgtcgcttaaaacacacacattttcactctagaaccagtagagtactcttcagt 500

                                                                       
Query: 301 gagtcatgacaactgaatgcttcaaggtccccccaccaacggacgtcttatcagccttga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gagtcatgacaactgaatgcttcaaggtccccccaccaacggacgtcttatcagccttga 560

                                                                       
Query: 361 aactcctccctccgggacccggaccgggaccaacacaggtgttccagcttcttccgcccc 420
           ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aactcctccctacgggaccgggaccgggaccaacacaggtgttccagcttcttccgcccc 620

                                                                       
Query: 421 agccttcctgtttacctagttctgctccccattgaagtccaggcaaatagccagagctct 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agccttcctgtttacctagttctgctccccattgaagtccaggcaaatagccagagctct 680

                                                                       
Query: 481 ccaggcagtgtaaccaccactcaccaaattctttgctatccttttctgaggtaggctgag 540
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ccaggcagtctaaccaccactcaccaaattctttgctatccttttctgaggtaggctgag 740

                                                                       
Query: 541 caaacgaatactctcttctaattaggttaaggccggtctttnnntttttttttttttttt 600
           |||| ||||||||||||||||||||||||||||||||||||   ||||||||||||||||
Sbjct: 741 caaatgaatactctcttctaattaggttaaggccggtcttt---tttttttttttttttt 797

                
Query: 601 ttttt 605
           |||||
Sbjct: 798 ttttt 802


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 608
Length of database: 1008
Length adjustment: 10
Effective length of query: 598
Effective length of database: 998
Effective search space:   596804
Effective search space used:   596804
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)