XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCA
TCCTGTTACTGAAAGAAAAGATACTGAGACCCACAGCTAAACAGGAGGCT
GAGCTCAGAGAATCTTCTGGAAGAGAGATAGAAGAAGGATTTATAGGTGC
AAGGTGAGTCACAGACACCACAGAAAAACCCATAGATTCAACTCACCTGG
GTTCATAGGGGCTCACAGAGACTTGAACACCAAGCAGGGAGCATGAATGC
AATTGACCTAGGCCTTCTGCTCTGTTATGCATATGATACAGTTGTGTAAC
TTGGTTTTCTTATGGGACACCTAACAATGGGGTAGGGGCTGTCTCTGACA
TGTTTGGGACCCTTTTCCTTCTACTGGGTTGCCTTAATGTGGGGAGGGGG
ATACCTAGTCTTACTGCAAACTGATATGCCATGTTTGATTGATATCCTTG
GGAGGCCAGTTCTTTTCTCGAGGGAAATGGAGAAGGGGGGAAATTGGTGG
GGAAAGGGTTAGTGGGTTGGGGTATGAAATGGGAGGANNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNN

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXTCGTCGTCCCTTTCCCCTCCCCCATCTTCTTA
CCCCTGCTCACCTGTCACCGTGGTGCAACAGGGGTAGCTCAGGAACCTGA
GCCCTGAGCTTCCCACACCACCCTGCCCGTGGAACCCAGAATCCCCAGAA
GTTGGAGGCTGGGGTTGAGTGGTGGGGACCCAACCAGACCCAGAGACTCG
GAGCACTCCAGCAGATCATCTGTCCCCACCTCCCACCAAAAGCGCTGTTC
CTCGCGGCCCTCCGCTCTGTGTGCCCTGGGGCTTGTTTCTGCATCTCAGC
CAGCTCTCTAGCCAGTCAAGGTCCACCCGCTCAGGTGTGATGTTCCGCTG
ACCATCCTGACAGCACTCACCATGGTGTCCGCGCCCGGAGCCTAGGAAGC
AGCTTCCAGGCAAGAGTACCGCGGAAGGGACCCAGACAGCGACTACAGCG
GCGACAGTGCTCCCAGACCAGCACAGAGCTGAAGCTAGGGCATCAGTCTC
GGCCAACTCTGATTGCCACCTCTTCTCAGCCCAATGACGAGTGGAGCCGC
AAGAGGCTGGGCGCTGTTTCTTCCCATATCTTATCCAATCAGTGACAGAG
GAGGGAATTCAGATGGGCTCAGAGCTACTGTGCTCAAACATTTTCTCGCC
CCAGTCTGGTGACAAGTCATGT

Query= MSMg01no545_a09.g1 MSMg01no545_a09.g1 CHROMAT_FILE:
MSMg01no545_a09.g1 PHD_FILE: MSMg01no545_a09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:25:53 2005
         (498 letters)



>mm_chr3_81877942_81878839
          Length = 898

 Score =  955 bits (494), Expect = 0.0
 Identities = 497/498 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   tcgtcgtccctttcccctcccccatcttcttacccctgctcacctgtcaccgtggtgcaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcgtcgtccctttcccctcccccatcttcttacccctgctcacctgtcaccgtggtgcaa 260

                                                                       
Query: 61  caggggtagctcaggaacctgagccctgagcttcccacaccaccctgcccgtggaaccca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caggggtagctcaggaacctgagccctgagcttcccacaccaccctgcccgtggaaccca 320

                                                                       
Query: 121 gaatccccagaagttggaggctggggttgagtggtggggacccaaccagacccagagact 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaatccccagaagttggaggctggggttgagtggtggggacccaaccagacccagagact 380

                                                                       
Query: 181 cggagcactccagcagatcatctgtccccacctcccaccaaaagcgctgttcctcgcggc 240
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cggagcactccagcagatcatatgtccccacctcccaccaaaagcgctgttcctcgcggc 440

                                                                       
Query: 241 cctccgctctgtgtgccctggggcttgtttctgcatctcagccagctctctagccagtca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cctccgctctgtgtgccctggggcttgtttctgcatctcagccagctctctagccagtca 500

                                                                       
Query: 301 aggtccacccgctcaggtgtgatgttccgctgaccatcctgacagcactcaccatggtgt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aggtccacccgctcaggtgtgatgttccgctgaccatcctgacagcactcaccatggtgt 560

                                                                       
Query: 361 ccgcgcccggagcctaggaagcagcttccaggcaagagtaccgcggaagggacccagaca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ccgcgcccggagcctaggaagcagcttccaggcaagagtaccgcggaagggacccagaca 620

                                                                       
Query: 421 gcgactacagcggcgacagtgctcccagaccagcacagagctgaagctagggcatcagtc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gcgactacagcggcgacagtgctcccagaccagcacagagctgaagctagggcatcagtc 680

                             
Query: 481 tcggccaactctgattgc 498
           ||||||||||||||||||
Sbjct: 681 tcggccaactctgattgc 698


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 498
Length of database: 898
Length adjustment: 10
Effective length of query: 488
Effective length of database: 888
Effective search space:   433344
Effective search space used:   433344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)