XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCCTGTT
GGAATTGTAAAGCTTATTTCTGTGTACTATCATATTGTCTTTAAATAATG
ATACTTTGACTTCTTTCTTTCCCATTTGTATTTTCTTGATCTCCTTTGGT
TGTCTTATTTCTCTAGCAATACATTTCAAATTATTGCACAAAATAGAAGC
AGAAAGAACATTGCCCAGATCATTTTATGACTGCAAGTTTACCCTGCTGA
TCCACCCACATAAAGAGTCAAAGAAGAAAAAGGAATTACAGACCAATTTT
TCTCATGAACATAAATGAAAAATACTCAAAAAATACTTGCAAACTAAATA
CAAGAACACATCAAAAAGATCTGACTTGTGTCAGATACTGAGGGAATGGC
TAATGACTTGCCTGACTTGAGATCCATCCCATGAGAAAGAACCATTCCCT
GACAGTATTAATGGTTTTTCTGTTATGCCTGCAGACAGAGGCCTAGCAAA
ACTGTATTCTGAGAGGCTTCACCCAGCATCTTACCAAAGGAAATCCAGAG
ACCCACAATCACAAATTATCTAGAGGTCTTGTGGAAGAGTTGGGGGAAAG
ATGGATGAACTTGGAGAGGATAGGAACTTTACAAGAAGATGAACAAAATC
AAATAACCTGGTTCCTTGGGGGCTCCCAGAGACGGAACCACCCACCAAAG
TGCATACAGAGTCTGGACCCAGGCCCTCACACATATA

GGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXATACAGGTCACTGGAATCTTGCAGAATGTCAGTGTC
ATCAAGCAGAAACAAAATGTTCTGCATAAATTCAGTGATCCATGTTGCAC
TGAGTTTTCTTGAAAGGATATTGTTAGCTTCAGTAATATAGAGGGAGAAT
AATGAAGAGACCCTAGATTGGACAGAATCAAGCTTAAGTAGCAATTAGCA
ACAATGAATCTACTGTCAAAGAGAAACTTTCAGAGACAGTCATATCAGTA
TAACTGGAAGGAAAATTAATCCAGAAGAGAAAAGAACATGAATGTTGCTG
CCTATGAACCCTGAGGAAAAAAAAGCGTTTGCTTTTTAAATAGAGAAAAA
AAATCAGATATATAAATTCAAGGATAAGATGCAGAGAATTGAAGTACATT
TAATACTCATGACAATGTATATATTGACACATGTGTGTTCACACATGCAT
GAGGAAATAACAGATCAAATACTCTTTAGCTATAAAGAGACTTGTATTTC
AAATGATGTATGAGTTTATTTTTTTAAACTCACTTAAATAACTATGGTAT
ATAAGAGTCATTCTGTTGCCATCAAAGAAAACTGACCAGCTCTCTGAAAG
GCAGTATAAGAGTTTATGAAAAAATTAAATATTGTTGATACCAAATAACA
ATGCGTTCTAGTTAAAACACATACTACTATTGTGCAAGA

Query= MSMg01no545_h02.g1 MSMg01no545_h02.g1 CHROMAT_FILE:
MSMg01no545_h02.g1 PHD_FILE: MSMg01no545_h02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:26:24 2005
         (672 letters)



>mm_chr3_12702765_12703839
          Length = 1075

 Score = 1212 bits (627), Expect = 0.0
 Identities = 663/675 (98%), Gaps = 3/675 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   atacaggtcactggaatcttgcagaatgtcagtgtcatcaagcagaaacaaaatgttctg 60
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 875 atacaggtcactggaatcttgcagaatgtcagtgtcatcaagcagaaataaaatgttctg 816

                                                                       
Query: 61  cataaattcagtgatccatgttgcactgagttttcttgaaaggatattgttagcttcagt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 815 cataaattcagtgatccatgttgcactgagttttcttgaaaggatattgttagcttcagt 756

                                                                       
Query: 121 aatatagagggagaataatgaagagaccctagattggacagaatcaagcttaagtagcaa 180
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 755 aatatagagggagaataatgcagagaccctagattggacagaatcaagcttaagtagcaa 696

                                                                       
Query: 181 ttagcaacaatgaatctactgtcaaagagaaactttcagagacagtcatatcagtataac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 ttagcaacaatgaatctactgtcaaagagaaactttcagagacagtcatatcagtataac 636

                                                                       
Query: 241 tggaaggaaaattaatccagaagagaaaagaacatgaatgttgctgcctatgaaccctga 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 tggaaggaaaattaatccagaagagaaaagaacatgaatgttgctgcctatgaaccctga 576

                                                                       
Query: 301 gga-aaaaaaagcgtttgctttttaaatagagaaaaa-aaatcagatatataaattcaag 358
           ||  |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 575 ggggaaaaaaagtgtttgctttttaaatagagaaaaagaaatcagatatataaattcaag 516

                                                                       
Query: 359 gataagatgcagagaattgaagtacatttaatactcatgacaatgtatatattgacacat 418
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 515 gataagatgcagagaattgaagtacatttaatactcatgacaatgtacatattgacacat 456

                                                                       
Query: 419 gtgtgttcacacatgcatgaggaaataacagatcaaatactctttagctataaagagact 478
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 gcgtgttcacacatgcatgaggaaataacagatcaaatactctttagctataaagagact 396

                                                                       
Query: 479 tgtatttcaaatgatgtatgagtttattttttt-aaactcacttaaataactatggtata 537
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 395 tgtatttcaaatgatgtatgagtttattttttttaaactcacttaaataactatggtata 336

                                                                       
Query: 538 taagagtcattctgttgccatcaaagaaaactgaccagctctctgaaaggcagtataaga 597
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 335 taagagtcattctgttgccatcaaagaaaactgaccagctctctgaaaggcagtaaaaga 276

                                                                       
Query: 598 gtttatgaaaaaattaaatattgttgataccaaataacaatgcgttctagttaaaacaca 657
           ||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 275 gtttatgaaaaaaataaatattgttgataccaaataacaatgagttctagttaaaacaca 216

                          
Query: 658 tactactattgtgca 672
           |||||||||||||||
Sbjct: 215 tactactattgtgca 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 672
Length of database: 1075
Length adjustment: 10
Effective length of query: 662
Effective length of database: 1065
Effective search space:   705030
Effective search space used:   705030
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)