XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCTGA
TCTTTCCAGAACTTTTATCATGAATGGGTGTTGGATCTTGTCAAATGCTT
TTTCTGCATCCAACGAGATGATCATGTGGTTTTTGTCTTTGAGTTTGTTT
ATATAGTGGATTACATTGATGGATTTTCGTATATTAAACCATCCCTGCAT
TCCTGGAATAAAACCTACTTGGTCAGGATGGATGATTGCTTTAATGTGTT
CTTGGATTCGGTTAGCGAGAATTTTATTGAGGATTTTTGCATCGATATTC
ATAAGAGAAATTGGTCTGAAGTTCTCTATCTTTGTTGGATCTTTCTGTGG
TTTAGGTATCAGAGTAATAGTGGCTTCATAAAATGAGTTGGGTAGAGTAC
TTTCTACTTCTATCTTGTGAAAAAGTTTGTGCAGAACTGGAATTAGATCT
TCTTTGAAGGTCTGATAGAACTCTGCACTAAACCCGTCTGGTCCTGGGCT
TTTTTTGGCTGGGAGACTATTTATAACTGCTTCTATTTCTTTAGGGGATA
TGGGACTGTTTAGAAGGTCAACTTGATCTTGATTCAACTTTGGTACCTGG
TATCTGTCCAGAAATTTGTCCATTTCGTCCAGGTTTTCCAGTTTTGTTGA
GTATAGCCTTTTGTAGAAGGATCTGATGGTGTTTTGGATTTCTTCAGGAT
CTGTTGTTATGTCTCCCTTTTCAGTTCTGATTTTGTTAATTAGGATTTT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXATGGAGGGGTAAAGCAAGAACAACTCTGCCTAG
AAGATTCCTGTACACATCCTTTGTTTGTGTTGATACAGCACTCTGAGTTT
CTGACTTCCTCATTTATGACAAATTAACACTGAGGCTAGAAGTATAGTTC
AAAGTTTTTTCTGCTTTTGCAGAATACATGGGTTCAGTACTTAAAGTGGC
TAACAAACATCTTAATTCTAGTGAATGAACCTGATTTCTTTATCATCCTC
CACAGAGAGCAATCAAACATGCGCACTCACACACACACACACACACACAC
ACACACACACACACACACACACATACACATACACACACGTACTTTCTGAA
CATACATAAATCTCAAGCAAAAGAACCATACACATAAAATAAAAAAATAC
ATATTAAATAGAAGTAATCTTCACATCACTAATACAGTTCCAAAAGAGAA
AAATACCTGTATTAAGGACATGCAAGGATGTCTACTGTTCTGATCACAGA
CCTTAGAAATAAAGTGGAGACTGTGGCCTGTGTGTAACTTTTCTCAAGCC
ATGTTTGTCTTTCCTTGTGTTTGACTAGGGAATATTAAGTGTCTTGGAAC
GTGGTTTCCTTGTGTTCCTTTTTCTTGAATTTTCTACCCTAGATTTCTAG
AATAAAAGGAACCACCTAGGACTGTCACAAATCCCCTTTGAAG

Query= MSMg01no546_b13.g1 MSMg01no546_b13.g1 CHROMAT_FILE:
MSMg01no546_b13.g1 PHD_FILE: MSMg01no546_b13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:27:16 2005
         (614 letters)



>mm_chr3_91543011_91544024
          Length = 1014

 Score = 1009 bits (522), Expect = 0.0
 Identities = 589/616 (95%), Gaps = 10/616 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttgatacagcactctgagtttctgacttcctcatttatgacaaattaacactgaggctag 60
           ||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||
Sbjct: 207 ttgatacagcactctgagtttctgacttcctaatttatggcaaattaacattgaggctag 266

                                                                       
Query: 61  aagtatagttcaaag--ttttttctgcttttgcagaatacatgggttcagtacttaaagt 118
           |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 aagtatagttcaaagttttttttctgcttttgcagaatacatgggttcagtacttaaagt 326

                                                                       
Query: 119 ggctaacaaacatcttaattctagtgaatgaacctgatttctttatcatcctccacagag 178
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ggctaacaaacatcttaattctagtgaatgaacctgatttctttatcatcctccacagag 386

                                                                       
Query: 179 agcaatcaaacatgcgcactcacacacacacacacacacacacacacacacacacacaca 238
           ||||||||||||  ||      ||||||||||||||||||||||||||||||||||||||
Sbjct: 387 agcaatcaaaca--cg------cacacacacacacacacacacacacacacacacacaca 438

                                                                       
Query: 239 cacacatacacatacacacacgtactttctgaacatacataaatctcaagcaaaagaacc 298
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 439 cacacatacacatacacacacgtactttctgaacatatataaatctcaagcaaaagaacc 498

                                                                       
Query: 299 atacacataaaataaaaaaatacatattaaatagaagtaatcttcacatcactaatacag 358
           ||||||| |||||||||||||||| |||||||||||||||||| |||||||||| ||| |
Sbjct: 499 atacacaaaaaataaaaaaatacacattaaatagaagtaatctccacatcactattactg 558

                                                                       
Query: 359 ttccaaaagagaaaaatacctgtattaaggacatgcaaggatgtctactgttctgatcac 418
           ||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 559 ttctaaaagagaaaaatacctgtattaaggacatgcaaagatgtctactgttctgatcac 618

                                                                       
Query: 419 agaccttagaaataaagtggagactgtggcctgtgtgtaacttttctcaagccatgtttg 478
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 619 agaccttagaaataaagtggagactggggcctgtgtgtaacttttctcaagccatgtttg 678

                                                                       
Query: 479 tctttccttgtgtttgactagggaatattaagtgtcttggaacgtggtttccttgtgttc 538
           ||||||||||||||||||||||||||| |||||||||||||||||||||||||  |||||
Sbjct: 679 tctttccttgtgtttgactagggaatactaagtgtcttggaacgtggtttcctaatgttc 738

                                                                       
Query: 539 ctttttcttgaattttctaccctagatttctagaataaaaggaaccacctaggactgtca 598
           ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||
Sbjct: 739 ctttttcttgaattttctaccctagatgtctagaataaaaggaaccacctaggactatca 798

                           
Query: 599 caaatcccctttgaag 614
           ||||||||||||||||
Sbjct: 799 caaatcccctttgaag 814


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 48
Number of extensions: 19
Number of successful extensions: 19
Number of sequences better than 10.0: 1
Number of HSP's gapped: 11
Number of HSP's successfully gapped: 1
Length of query: 614
Length of database: 1014
Length adjustment: 10
Effective length of query: 604
Effective length of database: 1004
Effective search space:   606416
Effective search space used:   606416
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)