XXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCAGAGGATCCGCGGAATTC
CAGAATAATCTTTCACTCCATATCTCATCTCATGACACCCTAGATGGAGC
TGCAAGGTCTTGGGCACCCTGCCCTCACAGCGTTTCTGGGATCAGACTCC
TGGGCTGTGTAACACAGGCTGTCTGTGGCTGGCTGTCTTTTCTAGGCTGC
TGCCACTCAGTGCCCAGGGCTATGGCTTCTGGGATCCCACTGCACAGCAC
TGCCCTCAGTGCTGGCTCCCCAACAGAGACAACTGAAGGTAAGCAAAGCA
TGGTGGGGTATGTGCCAGCAGAAGCATGTGGAAGAAGCTCTCACACTAGG
CAGATCTGGAAGCACAGATGTGGGCCAGAGCAGGCATCCATCACCTTCTA
GCAACCTACTTATGCCAAGTGGGCCATAGTCCAAAAGGAACCAGAACCTC
CCCCAAACAGTGCCATCAACTAGGCACCCAGTGTTCTAAAACAGAAGCCA
AAGGAGGATACTTTATGGTCAAACTCTTGACACCATAGTAGTGAATCTTT
ACAAAGATTCTTACTCAATATCAGCCTAGTCTCCCAGGCAGTTGGGAAAC
ATTAAAAAATGTTGATGGACCCCCTATAACCTATAGTCTGTTTCTCTATG
GAATTAGCATCATATGGATGTAAATATTGCTGCTATAGTTTGGATCTGGT
CCATGTGTTAAAAGAATAGGGCTCACTAGTGTGAAACTATTGGAACA

GTGTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXCTGATAAGGAGACTTGGTGAAGACAGTCTCTTT
CCAGAGGTCGGGGGTCAGGTAGCTGTAAGTCTTGGAGATGGCATCAAAGG
TGGCCTTAGCAAAGTTGCCAGGGTGGCAGTGCAGCCTCTGGCTGAAGTGT
AGCAGTCATCTATACCGGCCATCATCAGGAGCTTCTTGGGCACAGGAGCA
GAGACAATGCCAGTGCCTCTGGGGCAGGGATGAGACGCACCAGCACAGAG
CCACAGTGGCCTGTCACCTTGCATGGAACAGTGTGGGGCTTACCAATGGT
AAGATATATATTATGTGGTAGGACATATATATGGTGGTAAGATATATCTC
AAAGATAGCTATATATGTATACATATATGTATTAATACAGTAAAATATAA
TACTGTAAAATATTTTATTTGCATTTAATAGAGGAAAAAGTACTCTGCAG
CTTTCCTTACAGATTTGCAGAAACAATGTAATAGTAATAAAGTCAGGGTA
ATTGTTCCACCTTATCTGTGGCAAAAATGTGGAAAAAAATTTTGTCTATA
AGGTCTTCTCAGGGTTTAATTAAGATGGGGGTGATTTTGAACATCTTGAC
AGGAGGTAAAAAGGTGAAATTTAGATCTGCATTTTGAGATTATTTTATGT
ACCCAAAAAGCTTGATCTATCAGGTACTTGTCAGTAA

Query= MSMg01no546_c15.b1 MSMg01no546_c15.b1 CHROMAT_FILE:
MSMg01no546_c15.b1 PHD_FILE: MSMg01no546_c15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:27:22 2005
         (677 letters)



>mm_chr3_65521010_65522086
          Length = 1077

 Score = 1133 bits (586), Expect = 0.0
 Identities = 601/606 (99%)
 Strand = Plus / Minus

                                                                       
Query: 7   gaattccagaataatctttcactccatatctcatctcatgacaccctagatggagctgca 66
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 gaattccagaataatctttcactccatatctcatctcatgacaccctagatggagctgca 547

                                                                       
Query: 67  aggtcttgggcaccctgccctcacagcgtttctgggatcagactcctgggctgtgtaaca 126
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 546 aggtcttgggcaccctgccctcacagcgtttctgggatcagactcctgggctgtataaca 487

                                                                       
Query: 127 caggctgtctgtggctggctgtcttttctaggctgctgccactcagtgcccagggctatg 186
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 486 caggctgtctgtggctggctgtcttttctaggctgctgccacacagtgcccagggctatg 427

                                                                       
Query: 187 gcttctgggatcccactgcacagcactgccctcagtgctggctccccaacagagacaact 246
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 gcttctgggatcccactgcacagcactgccctcagtgctggctccccaacagagacaact 367

                                                                       
Query: 247 gaaggtaagcaaagcatggtggggtatgtgccagcagaagcatgtggaagaagctctcac 306
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 366 gaaggtaagcaaagcatggtggggtatgtgccagcagaagcatgtggaagaggctctcac 307

                                                                       
Query: 307 actaggcagatctggaagcacagatgtgggccagagcaggcatccatcaccttctagcaa 366
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 actaggcagatctggaagcacagatgtgggccagagcaggcatccatcaccttctagcaa 247

                                                                       
Query: 367 cctacttatgccaagtgggccatagtccaaaaggaaccagaacctcccccaaacagtgcc 426
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 cctacttatgccaagtgggccatagtccaaaaggaaccagaacctcccccaaacagtgcc 187

                                                                       
Query: 427 atcaactaggcacccagtgttctaaaacagaagccaaaggaggatactttatggtcaaac 486
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 186 atcaactaggcacccagtgttctaaaacagaagccaaaggaggatactttatagtcaaac 127

                                                                       
Query: 487 tcttgacaccatagtagtgaatctttacaaagattcttactcaatatcagcctagtctcc 546
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 tcttgacaccatagtagtgaatctttacaaagattcttactcaatatcagcctagtctcc 67

                                                                       
Query: 547 caggcagttgggaaacattaaaaaatgttgatggaccccctataacctatagtctgtttc 606
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66  caggtagttgggaaacattaaaaaatgttgatggaccccctataacctatagtctgtttc 7

                 
Query: 607 tctatg 612
           ||||||
Sbjct: 6   tctatg 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 677
Length of database: 1077
Length adjustment: 10
Effective length of query: 667
Effective length of database: 1067
Effective search space:   711689
Effective search space used:   711689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)