XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCAG
TTTCTCTGTAGAGCTCACAAATGGGCAAAGTTTCTAAGGGTGATGAATTA
GCCAACAGAGCTTCAAAGGCTGATATTAGAACGAATGCCCAACACAGGTC
CATTTTGAAAACATTAGAACTTTTTTTCCATCTTCAAAAATACACTTCAC
AAAATCAAATGGGCAAAGAGATCATAAAAGGCAATAAAAGCCATTCAACA
AGACAGTGAGAGTTACCTGAAAACATTTTTTTCTATACCAGTGTTCCTTT
TAACTTGGTTAGTGTTGAATCATCAACGAAATCACCCAAATAAAAGGAAG
ATTTTTGTCAGACTCTTACTGTGCCAACCAAAGGAAAGTAATTCCAAATA
CATAAGAAGCCCTACAGATTGGTGATTATTTATAGGAAATTACCAATGTT
ACAGTGGACTTTGACCAACTTTACCTTAAAAAATACAAAGCATTTCTGTT
TCACAGAACAAATTCTTGTGATGTAAGGGAATATTTATCCAGTTTTGTAT
TTTATATATAAAACATATCACTTGCTTCTCTTCAAAGGGCAATAATCAGT
ATAAAATCTCTTTTAGTACAAAATGTTCACCCTTGAACATTAGAACATGT
AAATTGGTTAAGAAATAGCCATTGATTTCTACTATTATTCTGGAGTTATA
AAAATGTTTAAAGGTGTTTATGCATTTTTACTAGG

TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXCACATAAAACCAGAGACACTGCAACTTATAGA
GGTGAAAGTGGGGACAAGCCTCGAAGATGTGGGCACAGGGGAAAAATTTC
CTGAATAGAACAGCAATGGCTTGTGCTGTAAGAATTGACAAATGGGACCT
CATAAAACTGCAAATCTTCATTAAGGCAAAAGACATTGTCAATAAGACAA
AAAGGCCACCAACAGATTGGGAAAGGATCTTTACCTATCCTAAATCAGAT
AGGGGACTAATTTCCAATATATATAAAGATCTCAAGAAGGTGGCCTGCAG
AAAATCAAATAACCCCATTAAAAAATGGGGCTCAGAGCTAAACAAAGAAT
ACTCACCTGAGGAATACTGAATGGCTGAGAAGCACCTGAAAAAATGTTCA
GCATCCTTAATCATCATGGAAACGCAAATCAAAACAACCCTGAGATTCCT
TCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGCAGAT
GCTGGCGAGGATTGGAGAAATAATAACACTCCTCCATTGTTGGTGGGATT
GCAAGATTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAGAATA
TTCAACATAGTACTTCATGAGGATCCCGAAATCCTCTCCTGTGCATATAC
CCAGATGAGGTCACAAATGGTAAGAAAGATACCTG

Query= MSMg01no546_h02.b1 MSMg01no546_h02.b1 CHROMAT_FILE:
MSMg01no546_h02.b1 PHD_FILE: MSMg01no546_h02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:27:44 2005
         (650 letters)



>mm_chr3_72541912_72542961
          Length = 1050

 Score = 1226 bits (634), Expect = 0.0
 Identities = 643/646 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcagtttctctgtagagctcacaaatgggcaaagtttctaagggtgatgaattagc 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 850 gaattcagtttctctgtagagctcacaaatgggcaaagtttctaagggtgatgaattagc 791

                                                                       
Query: 65  caacagagcttcaaaggctgatattagaacgaatgcccaacacaggtccattttgaaaac 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 790 caacagagcttcaaaggctgatattagaacgaatgcccaacacaggtccattttgaaaac 731

                                                                       
Query: 125 attagaactttttttccatcttcaaaaatacacttcacaaaatcaaatgggcaaagagat 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 attagaactttttttccatcttcaaaaatacacttcacaaaatcaaatgggcaaagagat 671

                                                                       
Query: 185 cataaaaggcaataaaagccattcaacaagacagtgagagttacctgaaaacattttttt 244
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 cataaaaggcaataagagccattcaacaagacagtgagagttacctgaaaacattttttt 611

                                                                       
Query: 245 ctataccagtgttccttttaacttggttagtgttgaatcatcaacgaaatcacccaaata 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 ctataccagtgttccttttaacttggttagtgttgaatcatcaacgaaatcacccaaata 551

                                                                       
Query: 305 aaaggaagatttttgtcagactcttactgtgccaaccaaaggaaagtaattccaaataca 364
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 550 aaaggaagatttttgtcagactcttactgtgccaaccaaaggaaagtaattctaaataca 491

                                                                       
Query: 365 taagaagccctacagattggtgattatttataggaaattaccaatgttacagtggacttt 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 taagaagccctacagattggtgattatttataggaaattaccaatgttacagtggacttt 431

                                                                       
Query: 425 gaccaactttaccttaaaaaatacaaagcatttctgtttcacagaacaaattcttgtgat 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 gaccaactttaccttaaaaaatacaaagcatttctgtttcacagaacaaattcttgtgat 371

                                                                       
Query: 485 gtaagggaatatttatccagttttgtattttatatataaaacatatcacttgcttctctt 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 gtaagggaatatttatccagttttgtattttatatataaaacatatcacttgcttctctt 311

                                                                       
Query: 545 caaagggcaataatcagtataaaatctcttttagtacaaaatgttcacccttgaacatta 604
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 caaagggcgataatcagtataaaatctcttttagtacaaaatgttcacccttgaacatta 251

                                                         
Query: 605 gaacatgtaaattggttaagaaatagccattgatttctactattat 650
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 gaacatgtaaattggttaagaaatagccattgatttctactattat 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 650
Length of database: 1050
Length adjustment: 10
Effective length of query: 640
Effective length of database: 1040
Effective search space:   665600
Effective search space used:   665600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)