TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC
CAGTTCCAGGAGATGCAGTGTCCTCTTATGGCCTCCTTGGGCACTGCATG
CAATTGGATGTGGATAGGAGGCCACAATCCATTTACGCTGATAGTCCACT
ATATTAATAGTCTAGAGCTCTTGTCCCTGTTCTGTTGCTTCTCTTTGTTT
TGGTCTCTTGGAAGCCAAGGTCAGTAAAGAAACAGTGAAGACAAATTTTA
GTTTTTTAAAAAATTTACCTCCATTTTCACATGATATATATGGGGAATGT
GTGGACTCAGAGGAATAAGCCACTGTCATTTTCCTTGTCTGGATTTTTCG
GCTTCTAAGGCTGAGGATAAGATATCTAGTCAATTTGTTATCCGTAGTTT
TAACTATTGTAAGGCATCTCCAAACTTTCTAGAGTAATAGCTGAATTTAA
ACAATTAATATAATTTTGTGCCACATAGCTTTGGGGGACAGAAACCGGAT
TCACACAATCAACTGTGACGTTGGAGGTTACAGCCCATTCAAACAGCCAG
ATATAACTACTAGAGAATTTCAGTAAAATTAACTAAGAGCACCACTGCTT
CCAAGAGATTCTGTGGCCATTTGAAAGAATCAAGTCCAGGCTTCCATATA
ATGTATGAATCTCTTTGAAAATGTAACCTAAATGTGATCATATTAGATTG
AAGTCTTTAGTCAAAATGCTTAAATAGA

TGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXTTTGTTTATCTCTGAGCCCCATCTTTTA
AGGGGGTTATTTGATTTTCTGGAGTCCATCCTCTTGAGTTCTTTATATAT
ATTGGATATTAGTCCCCTATCTGATTTAAGATAGGTAAAGATCCTTTCCC
AATCTGTTGTTGGCCTTTTTTTCTTATTGACGGTGTCTTTTGCCTTGCAG
AAGCTTTGCAGTTTCAGGAGGTCCCATTTGAACAGTAAATGTTGCTTTTA
TTCATTTCCTCAGGTGAAATGATTAGATGAAAGCCATTCAAAAGCTTTTC
AAATATATGGCTAGGGCTGAGCTCAGAGCATTCTATATAACTATCCCTAT
GTCTTGGCCTGGAAAGTTCTAGCCTTCATACAATCTGGTCTTCTATAAGT
CCAGAACTTTAAGGTTTCAGCTTCCAGCCTCCATCTTCTAAACTAGACCT
CAAATGTTTCAGCCTCTGAGACTTGCTGTGGAATAATATCACCCTTTTTG
CTCTTTCTGACCTCTGGCTGGCTAGTTCACTTAGCTGCTCTGGCTCAAAC
TTCTTTCCAAACTGACTGACTCAAATTGACTTTTCTTGGCTTATGATTGG
ATTGATCTGCTTAGAAAGACTGCATCTGAACTCCACAAACTGAACTGCTC
CAAACTGAATTGAATTGAACTGAACTGA

Query= MSMg01no546_n08.b1 MSMg01no546_n08.b1 CHROMAT_FILE:
MSMg01no546_n08.b1 PHD_FILE: MSMg01no546_n08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:28:15 2005
         (688 letters)



>mm_chr3_45129127_45130214
          Length = 1088

 Score = 1052 bits (544), Expect = 0.0
 Identities = 547/548 (99%)
 Strand = Plus / Plus

                                                                       
Query: 141 tctgttgcttctctttgttttggtctcttggaagccaaggtcagtaaagaaacagtgaag 200
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 tctgttgcttctctttgttttggtctcttggaagccaaggtcagtaaagaaacagtgaag 400

                                                                       
Query: 201 acaaattttagttttttaaaaaatttacctccattttcacatgatatatatggggaatgt 260
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 acaaattttagttttttaaaaaatttacctccattttcacatgatatatatggggaatgt 460

                                                                       
Query: 261 gtggactcagaggaataagccactgtcattttccttgtctggatttttcggcttctaagg 320
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 gtggactcagaggaataagccactgtcattttccttgtctggatttttcggcttctaagg 520

                                                                       
Query: 321 ctgaggataagatatctagtcaatttgttatccgtagttttaactattgtaaggcatctc 380
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 ctgaggataagatatctagtcaatttgttatccgtagttttaactattgtaaggcatctc 580

                                                                       
Query: 381 caaactttctagagtaatagctgaatttaaacaattaatataattttgtgccacatagct 440
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 581 caaactttctagagtaatagctgaatttaaacaattaatataattttgtgtcacatagct 640

                                                                       
Query: 441 ttgggggacagaaaccggattcacacaatcaactgtgacgttggaggttacagcccattc 500
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 ttgggggacagaaaccggattcacacaatcaactgtgacgttggaggttacagcccattc 700

                                                                       
Query: 501 aaacagccagatataactactagagaatttcagtaaaattaactaagagcaccactgctt 560
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 aaacagccagatataactactagagaatttcagtaaaattaactaagagcaccactgctt 760

                                                                       
Query: 561 ccaagagattctgtggccatttgaaagaatcaagtccaggcttccatataatgtatgaat 620
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 ccaagagattctgtggccatttgaaagaatcaagtccaggcttccatataatgtatgaat 820

                                                                       
Query: 621 ctctttgaaaatgtaacctaaatgtgatcatattagattgaagtctttagtcaaaatgct 680
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 821 ctctttgaaaatgtaacctaaatgtgatcatattagattgaagtctttagtcaaaatgct 880

                   
Query: 681 taaataga 688
           ||||||||
Sbjct: 881 taaataga 888


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 688
Length of database: 1088
Length adjustment: 10
Effective length of query: 678
Effective length of database: 1078
Effective search space:   730884
Effective search space used:   730884
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)