AATTTGGGCCGCTATACGACTACTATAGGTTGAGGATCCGCGGAATTCAA
GATGATGTATATTTCCTTCTGAGTCTTGTTTCCAGGATGGGTCACTGTAA
TTTTCGAATCTCATTTCTGTCTCCTAGAAATATTACGATATAGATACTGT
TCCACTTGATTTTATTCAATAAATTTCCGTTTTAGTTCAGTTGTTTTTAT
TCTTCTCACTTTTGAATGCTTTTTAACGACCACCTTCATAGGTCTTCATT
TGTATTACAGAGCTCACTGCTGAATCTCCTATGTGTGAGCTCTTTAGTTC
AGGTTTTCTGTTTCAACTCGCCATTCTGTTCTTTCCTTTGTGTGTCTTGA
GCCTTGTTCAAGGTCTTTGGTGCACAAGACACTCTCACCATGGCTATTAT
GGAGTCTCCTTTGGATGCTTCATCTTTCCAATTCTTTTGACTAAGAATCT
GGAGTCTTATTTGGTGCTTCAGGGCTATTTTCCATTTTCATGTGTGGATC
TGTGCATTTGAAGAAAAAGTGCCACTTCTCCTCTTCTTTATATATTGTTT
CATACATGGTAAATCTATTTAAACTCTGAAACTTTAGAAAGGATACAATT
TATGTAGGCCTAGTCTGACCCATTTCCTTCTCAGGGACTTGCATTCTTTT
GCTTCTTGGTGACTTTACTGCAAATTATTTGGNTCTACAACATTGAACTC
TCACACTTTCCTTATTCTGAACAGTCATGATATTTAAGCATTTTGGGGCT
CTCATCC

AGTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXAACACCCCACTCTCACCAATAGAAAGGTCATCC
AGAAATAGAGAAATAGTGGGGCAGATGTTATGACTCTAATGAACTTAACA
AATATTTATAAAATATTTCACCCCAACACAATAGAATATAAATTCTTCTC
AGGACCTCATGGAGCCTCCTCCAAAACTGACCATATACTCCATCACAAAG
GAAGTCTTAACAGATAGGAGAAAATTGAATAACCCCCTGTGTCCTATCAG
ATCACCCTGGATTAAAGCAGGATTTTAACAATAGAAAGCCTATAACCTTG
GAAAGTGAACAACTCACTACTAAATGACCCCTGGGTCAAAACAGAAGTAA
TGAATAAATTAAAGATTTTCTAGAATTCAGTAAAAGTGAGTTCACAACAC
AACTAAACTTACAGGATACAATGAAAGTAATGTTAACAGGAAACTTTATA
ACACTAAGTGCCTTCATAAAAAAAAAATGAGAGAGATCTCATACTAGCAA
CTCAAAAGCACACGTGAAAACTCTAAAACAAAGAGAATCAAACATCCAAA
AAGAGTAGACAATAGAAAATAATCAAACTCAAGGCTGAAATCAATAAAAT
AGAAATAAAAGAACAATACAAACAGTTAAAAAAAATAGAGTCAATTCTTT
GAGAAATGAGCAAGACAGAAAAATCCTTATCCACACTGAATAAAGGGCAG
N

Query= MSMg01no547_f22.b1 MSMg01no547_f22.b1 CHROMAT_FILE:
MSMg01no547_f22.b1 PHD_FILE: MSMg01no547_f22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:28:59 2005
         (552 letters)



>mm_chr3_158140526_158141477
          Length = 952

 Score = 1036 bits (536), Expect = 0.0
 Identities = 545/548 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   ggaattcaagatgatgtatatttccttctgagtcttgtttccaggatgggtcactgtaat 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ggaattcaagatgatgtatatttccttctgagtcttgtttccaggatgggtcactgtaat 264

                                                                       
Query: 65  tttcgaatctcatttctgtctcctagaaatattacgatatagatactgttccacttgatt 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tttcgaatctcatttctgtctcctagaaatattacgatatagatactgttccacttgatt 324

                                                                       
Query: 125 ttattcaataaatttccgttttagttcagttgtttttattcttctcacttttgaatgctt 184
           |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 325 ttattcaataaatttctgttttagttcagttgtttttaatcttctcacttttgaatgctt 384

                                                                       
Query: 185 tttaacgaccaccttcataggtcttcatttgtattacagagctcactgctgaatctccta 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tttaacgaccaccttcataggtcttcatttgtattacagagctcactgctgaatctccta 444

                                                                       
Query: 245 tgtgtgagctctttagttcaggttttctgtttcaactcgccattctgttctttcctttgt 304
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 445 tgtgtgagctctttagttcaggttttctgttccaactcgccattctgttctttcctttgt 504

                                                                       
Query: 305 gtgtcttgagccttgttcaaggtctttggtgcacaagacactctcaccatggctattatg 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gtgtcttgagccttgttcaaggtctttggtgcacaagacactctcaccatggctattatg 564

                                                                       
Query: 365 gagtctcctttggatgcttcatctttccaattcttttgactaagaatctggagtcttatt 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gagtctcctttggatgcttcatctttccaattcttttgactaagaatctggagtcttatt 624

                                                                       
Query: 425 tggtgcttcagggctattttccattttcatgtgtggatctgtgcatttgaagaaaaagtg 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tggtgcttcagggctattttccattttcatgtgtggatctgtgcatttgaagaaaaagtg 684

                                                                       
Query: 485 ccacttctcctcttctttatatattgtttcatacatggtaaatctatttaaactctgaaa 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ccacttctcctcttctttatatattgtttcatacatggtaaatctatttaaactctgaaa 744

                   
Query: 545 ctttagaa 552
           ||||||||
Sbjct: 745 ctttagaa 752


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 552
Length of database: 952
Length adjustment: 10
Effective length of query: 542
Effective length of database: 942
Effective search space:   510564
Effective search space used:   510564
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)