XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTAT
AAGACTTTTAAAGAATAGTTTTAATACCTTTCAAACTATTCCACAAAATA
GAATCAGAAAAATATTGCCAAAGTCATTGTATGGGGCCACAGTCACCATG
ATAACAAAAATATTCAAAGATAATTTCAGATCAATTTCCCTTATGAAATA
ACATTAATGCAAAAGTACTCAGTAAATATATACAAACCAAATCCAAGAAC
ATATCAAAAGCATCATTCACCATGATTAAGAAGGTTTCATCCCAGAGATA
TATAGATGGTTCAACCAATGAAAAACCATCGATGTAATCCACCATATAAA
AAAAAGAAAGAAAGAAAGAAACCAACCACATGATCATCTCATTAGATATT
GAAAAAGGCTCTGACCAAATCTAACACTCCTTCATGATAAAGCTCTTAGA
AAGATCAGGGGTACAGGCACATATCTAAACATGAAAAGGTAAAATAAAGC
AAGTGATAGCCAATATCAAATTAAATGTAAAGAAATTTAAATCAATTCCA
CTAAAATCAAGGACAAGACAAGCATGTGCACTCTTTATATTCAACATAGT
ACTTGAAGATTAGCTAGAGCAGTAAGACCACTAAAGGATATATAAAAGGA
ATACAAATTGGAAATAAATAAGTCAAAGTATTGTAGATGACATGAAATAT
TTATAAGTGACTCTAAAATTCTATCAGAGAACTCCTACAGCGG

TGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXCCACCCTCACCCCAAGGAACCCTCATCACAGGACT
CATCTGACTGAGAGCAGCCGTCACTTGTGAGCATCTCCTTCACTGTTACC
ATAGCCACCACCATCTTAGAAGGCTTTCAGTGTGCCTGGCACTGTCCTTG
ATGTCTTACCAGTTAACACAATGCTCAGCATAGACATTCAATGTGGGAAT
CATCATTGTCGTCCTTCAGCTAACAGAAAGTCAGGTTCCAAAGGACTAAG
ACAATGTCCCAAGTTGCAAAAGCTGGTGAGCTAGACTGCCAGAAGATAAA
CCCTGTGATGTGACATGTGGACTTTATTTTGTGTGTGTGTGCTACCCAGT
ACCACTTGGTACCATCTCAGCATCACTTGCTTCTTGGAATCCCTGCTGAT
TGTGTCAGCTCCTTTTGCCTCTTTGTCTAGGAAGCTGGGAGTGGTGAGAA
GCCCAGAGGCTACATTCAGTGGAACGTTTTAGTTCTGTGGCTGCTCACAA
TCCCCATGGCCTCTAAAAGGGGCCTCCTATAGAAGGTGTCACTGTTAATG
GCAAATGGAGCTCTGATCACAGGAGGAATGGGGACAGGAGCTGAGGCCAT
TATTCTCTATTCTAAGATGTCTAAAGCAGAGCATATCAGCTTTTATGCTT
TCATACCTTGCTTTGAGGCCTGTACCTTGAAGGCTACCT

Query= MSMg01no547_l19.g1 MSMg01no547_l19.g1 CHROMAT_FILE:
MSMg01no547_l19.g1 PHD_FILE: MSMg01no547_l19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:29:27 2005
         (667 letters)



>mm_chr3_29287011_29288077
          Length = 1067

 Score = 1214 bits (628), Expect = 0.0
 Identities = 658/668 (98%), Gaps = 2/668 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ccaccctcaccccaaggaaccctcatcacaggactcatctgactgagagcagccgtcact 60
           |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||
Sbjct: 201 ccaccctcaccccaaggaaccctcatcacaggactcatctgactgatagcagccatcact 260

                                                                       
Query: 61  tgtgagcatctccttcactgttaccatagccaccaccatcttagaaggctttcagtgtgc 120
           ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 261 tgtgagcatatccttcactgttaccatagccaccgccatcttagaaggctttcagtgtgc 320

                                                                       
Query: 121 ctggcactgtccttgatgtcttaccagttaacacaatgctcagcatagacattcaatgtg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctggcactgtccttgatgtcttaccagttaacacaatgctcagcatagacattcaatgtg 380

                                                                       
Query: 181 ggaatcatcattgtcgtccttcagctaacagaaagtcaggttccaaaggactaagacaat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggaatcatcattgtcgtccttcagctaacagaaagtcaggttccaaaggactaagacaat 440

                                                                       
Query: 241 gtcccaagttgcaaaagctggtgagctagactgccagaagataaaccctgtgatgtgaca 300
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtctcaagttgcaaaagctggtgagctagactgccagaagataaaccctgtgatgtgaca 500

                                                                       
Query: 301 tgtggactttat-tttgtgtgtgtgtgctacccagtaccacttggtaccatctcagcatc 359
           |||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 501 tgtggactttatgttt-tgtgtgtgtgctacctagtaccacttggtaccatctcagcatc 559

                                                                       
Query: 360 acttgcttcttggaatccctgctgattgtgtcagctccttttgcctctttgtctaggaag 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 acttgcttcttggaatccctgctgattgtgtcagctccttttgcctctttgtctaggaag 619

                                                                       
Query: 420 ctgggagtggtgagaagcccagaggctacattcagtggaacgttttagttctgtggctgc 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ctgggagtggtgagaagcccagaggctacattcagtggaacgttttagttctgtggctgc 679

                                                                       
Query: 480 tcacaatccccatggcctctaaaaggggcctcctatagaaggtgtcactgttaatggcaa 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tcacaatccccatggcctctaaaaggggcctcctatagaaggtgtcactgttaatggcaa 739

                                                                       
Query: 540 atggagctctgatcacaggaggaatggggacaggagctgaggccattattctctattcta 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 atggagctctgatcacaggaggaatggggacaggagctgaggccattattctctattcta 799

                                                                       
Query: 600 agatgtctaaagcagagcatatcagcttttatgctttcataccttgctttgaggcctgta 659
           ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 800 agatgtctaaagcagagcatatcggcttttatgttttcataccttgctttgaggcctgta 859

                   
Query: 660 ccttgaag 667
           ||||||||
Sbjct: 860 ccttgaag 867


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 667
Length of database: 1067
Length adjustment: 10
Effective length of query: 657
Effective length of database: 1057
Effective search space:   694449
Effective search space used:   694449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)