BAC Information

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BAC

Clone NameB6Ng01-001N15
Chromosome4 (Build37)
Map Location 69,202,580 - 69,203,737
singlet/doubletsinglet
Overlap genenone
Upstream geneDbc1
Downstream geneLOC622491, LOC433716, LOC100039888, LOC242497, LOC671064, Cdk5rap2, Megf9
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-001N15.bB6Ng01-001N15.g
ACCDH840055DH840056
length7991,147
definitionDH840055|Mus musculus domesticus DNA, BAC clone: B6Ng01-001N15, 5' end.DH840056|Mus musculus domesticus DNA, BAC clone: B6Ng01-001N15, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaaacatagctgaagcatcctgacaggctgatgctattcgaact
tgggagcatctagtgaaacatttgaacaaatctaagatctgatctcacat
tcactccttatataggaaaagattgaacagggcagagatcaaagaagtaa
cattgattaagtacctgtgacagcttgctgtacttcactcccatcatgtg
gactttacctgggttcctgtatcataacaattgacaaggcaaggttctaa
tatttaagatgatttaagatgtagacattattagtataaccaagatcacc
ctactagtactaagcacagatccagttttcatgtagctatggctctgtgg
gtctattctacatgtatagtacactctatctgtgttggggataagttctt
aggctttgtcttaagtcagttcccaaaatcacatggaaatctacgctgag
ggtccctgaccccaattggttgttgattggtcaataacagccaatagttg
ggcagggaaatgaaggtgggacctttagatttccaagacaagggataaag
gaaggaagcagcagaatcatcatgattggagagcaggtagatgagattta
agagctggagggagaaagcattcatttatggaagagttggggaagtagcc
ctacgggtcacttcccccacatgggtttgggatagcagagatcatataga
gatctagcaagcattaatttgggtaatattggagggaaatgtggtatcaa
caggaaggtgcctagtcggcttgtcattgagcttgtgataagatatcaa

gaattcctctccaaactggaataggagccatcatgagtaaattaaaccat
ttaataagagtggatagaaggtttagaggtggctcagtggctaacagcac
tggctactcctccagaggtcctgagtttaattcttagcacctaaattgtg
gctcaccagtatctatagctatagtcctatgggacatgatgccctcttct
ggtgtgcagacaaaacacccatatagaaaaaatacctaaataagtaaatc
tttaatttattattagtaatttattagtttattattattattaatctgac
ctgcaatatatgctgggacaaaggtaaagaaaaagcataggtaatgacca
accaatgactggcccaaattgaaacacattccatgggcatctgcattgtt
tattattctctgtttcttctcaaactggaaactgtgacccacgctgtttg
ctcatatttcactgagcacagacaccatctacagtctagtctttagtgtc
taaccctagactatgcacagaaaccatttctatgcccagaaagataatcc
acgtgcatctgataagaaatgacagagaggacgcttcctcttaggagaat
cagagcaccagagttaagcacaagatgcatcctggggaaaagtccaagcc
aagatcagtgcaaagtgaagaagacagcatgagtacatttgtcctctcat
tatgttgtctaagaagcctcccttaatgacgagtattcccaggcagaatc
atgtaccctgtcctagactgatttctcttagttggaaaattatcaaaagc
aagctggggggagattttattctgcttatacttctgagtcattactagca
gaaatcagagcaggaacctggaggcaggaactgaaacagaagctgtggag
aaacatgaggattggcttgctcagctattttcttatataagtgaggactt
caacctgggggtacttagtctacaacccacagtaagctaatcccttccat
atcaacattttacactaactaaaaaaggtctacaggcttggctataggct
aatctgaataagattttttcatgaagtatacctttcaggatgactctagc
tgggtcaggaacaaaagaacaaatgaaaaatactagctacctagcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_69202580_69203737
seq2: B6Ng01-001N15.g_68_1214

seq1  GAATTCCTCTCCAAACTGGAATAGGAGCCATCATGAGTAAATTAAACCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCTCCAAACTGGAATAGGAGCCATCATGAGTAAATTAAACCAT  50

seq1  TTAATAAGAGTGGATAGAAGGTTTAGAGGTGGCTCAGTGGCTAACAGCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATAAGAGTGGATAGAAGGTTTAGAGGTGGCTCAGTGGCTAACAGCAC  100

seq1  TGGCTACTCCTCCAGAGGTCCTGAGTTTAATTCTTAGCACCTAAATTGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTACTCCTCCAGAGGTCCTGAGTTTAATTCTTAGCACCTAAATTGTG  150

seq1  GCTCACCAGTATCTATAGCTATAGTCCTATGGGACATGATGCCCTCTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCACCAGTATCTATAGCTATAGTCCTATGGGACATGATGCCCTCTTCT  200

seq1  GGTGTGCAGACAAAACACCCATATAGAAAAAATACCTAAATAAGTAAATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTGCAGACAAAACACCCATATAGAAAAAATACCTAAATAAGTAAATC  250

seq1  TTTAATTTATTATTAGTAATTTATTAGTTTATTATTATTATTAATCTGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTTATTATTAGTAATTTATTAGTTTATTATTATTATTAATCTGAC  300

seq1  CTGCAATATATGCTGGGACAAAGGTAAAGAAAAAGCATAGGTAATGACCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAATATATGCTGGGACAAAGGTAAAGAAAAAGCATAGGTAATGACCA  350

seq1  ACCAATGACTGGCCCAAATTGAAACACATTCCATGGGCATCTGCATTGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATGACTGGCCCAAATTGAAACACATTCCATGGGCATCTGCATTGTT  400

seq1  TATTATTCTCTGTTTCTTCTCAAACTGGAAACTGTGACCCACGCTGTTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATTCTCTGTTTCTTCTCAAACTGGAAACTGTGACCCACGCTGTTTG  450

seq1  CTCATATTTCACTGAGCACAGACACCATCTACAGTCTAGTCTTTAGTGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATATTTCACTGAGCACAGACACCATCTACAGTCTAGTCTTTAGTGTC  500

seq1  TAACCCTAGACTATGCACAGAAACCATTTCTATGCCCAGAAAGATAATCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCCTAGACTATGCACAGAAACCATTTCTATGCCCAGAAAGATAATCC  550

seq1  ACGTGCATCTGATAAGAAATGACAGAGAGGACGCTTCCTCTTAGGAGAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTGCATCTGATAAGAAATGACAGAGAGGACGCTTCCTCTTAGGAGAAT  600

seq1  CAGAGCACCAGAGTTAAGCACAAGATGCATCCTGGGGAAAAGTCCAAGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCACCAGAGTTAAGCACAAGATGCATCCTGGGGAAAAGTCCAAGCC  650

seq1  AAGATCAGTGCAAAGTGAAGAAGACAGCATGAGTACATTTGTCCTCTCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATCAGTGCAAAGTGAAGAAGACAGCATGAGTACATTTGTCCTCTCAT  700

seq1  TATGTTGTCTAAGAAGCCTCCCTTAATGACGAGTATTCCCAGGCAGAATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTGTCTAAGAAGCCTCCCTTAATGACGAGTATTCCCAGGCAGAATC  750

seq1  ATGTACCCTGTCCTAGACTGATTTCTCTTAGTTGGAAAATTATCAAAAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTACCCTGTCCTAGACTGATTTCTCTTAGTTGGAAAATTATCAAAAGC  800

seq1  AAGCT-GGGGGAGATTTTATTCTGCTAATACTTCTGAGTCATTACTAGCA  849
      ||||| |||||||||||||||||||| |||||||||||||||||||||||
seq2  AAGCTGGGGGGAGATTTTATTCTGCTTATACTTCTGAGTCATTACTAGCA  850

seq1  GAAATCAGAGCAGGAACCTGGAGGCAGGAACTGAAACAGAAGCCATGGAG  899
      |||||||||||||||||||||||||||||||||||||||||||  |||||
seq2  GAAATCAGAGCAGGAACCTGGAGGCAGGAACTGAAACAGAAGCTGTGGAG  900

seq1  -AACATGAGGATTGGCTTGCTCAGCCTATTTTCTTATATAAGTGAGGACT  948
       ||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  AAACATGAGGATTGGCTTGCTCAG-CTATTTTCTTATATAAGTGAGGACT  949

seq1  TCAACCTGGGGGTACTTAGTCTACAACCCACAGTAAGCTAATCCCTTCCA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACCTGGGGGTACTTAGTCTACAACCCACAGTAAGCTAATCCCTTCCA  999

seq1  TATCAACATTTTACACTAACTAAGAAAAGGTCTTACAGCCTTGCCTATAG  1048
      ||||||||||||||||||||||| |||||||| ||||| |||| ||||||
seq2  TATCAACATTTTACACTAACTAA-AAAAGGTC-TACAGGCTTGGCTATAG  1047

seq1  GCTAATCTGATAGAGATTTTTTTTCCAATTGAAGT-TACCCTTTTCAGGA  1097
      ||||||||||   |||||||||   ||  |||||| ||||  ||||||||
seq2  GCTAATCTGAATAAGATTTTTT---CA--TGAAGTATACC--TTTCAGGA  1090

seq1  TGACTCTAGCTTGTGTCAAGGAGACAAAAGAACAAATGAAAAATAACTAG  1147
      |||||||||| || ||| |||| ||||||||||||||||||||| |||||
seq2  TGACTCTAGC-TGGGTC-AGGA-ACAAAAGAACAAATGAAAAAT-ACTAG  1136

seq1  CTAACTAGCAT  1158
      ||| |||||||
seq2  CTACCTAGCAT  1147


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