BAC Information

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BAC

Clone NameB6Ng01-002A19
Chromosome4 (Build37)
Map Location 71,355,056 - 71,356,157
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039565, LOC100039979, LOC667638
Downstream geneEG667649, Tle1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-002A19.bB6Ng01-002A19.g
ACCDH840191DH840192
length7991,092
definitionDH840191|Mus musculus domesticus DNA, BAC clone: B6Ng01-002A19, 5' end.DH840192|Mus musculus domesticus DNA, BAC clone: B6Ng01-002A19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcatattggttccctgaactgtagagtgagggctattatggttg
gaaaggccaaatggaagcctttagagttgcctctgccaaagaaaatagtg
aatcaaaaacagtatcgtattcctggaggaattgctgaaattactgccac
tatcaaggacttgaaagatgcaggggtggtggttcccaccacatctccgt
ttaactctcctatctggccagtgcagaaaacagatggatcatggagaatg
acagttgattatcgaaaactaaatcaggtagtaactccaattgcagctgc
tgtaccagatgtagtttcgttacttgagcaaattaacacatctcctggca
cctggtatgcggctattgatctggcaaatgccttcttctcagtacctgtc
cataaggaccaccagaagcaatttgctttcagttggcaaggccaacagta
taccttcacagttttgcctcaaggatatattaactctcctgccctgtgtc
ataatttagttagaagggatcttgatcgtttggatcttccacaaaatatc
acattggtgcactatattgatgacattatgctgattggaccaagtgagca
ggaagtagcaactactttggactcattggtaacacatatgcgtatcagag
gatgggaaataaatccaaccaaaattcaagggaccatctacctcagtgaa
attctttaggagtccagtggtgtggggcatgcagagatattccttctaag
gtgaaagataagtttatttgcacctggcccctcctacaaccaagaagga

gaattccttgcttttcaaatactactggacagccattcaggaaaaataag
atacagtgtattaaagaacctcagagacttgttattacaatatacccagt
tgctgctacagtgcccataaaataataaggataaggtatgtattgatttc
aattatctccttctttccagtaaaatgaagggggttgcataacaaaatta
agtctgtcagttagaaaattctattaaatttaatttagctataaaaacaa
accataggaatttcctccatcaataacaatgagccaaatttcagcatctc
atttcaccctgacatttagcaaatttgcttctagccaacctcatattcaa
gccattccttagaaaaacaaattttattgttcgggttagtttttcactca
gataaccatctaacattatttaagattcattgttctctttgggacttctg
gctaggggcatgtaacagagagatagcattaataaaatagtgctatctaa
gatttattcctatctcagtaggcctgttaaatgtcatgtgatccaaacct
atcagtatttaaaatttcaaagacaaactattgccaaacacctaaacatt
caccaacttcaaaactctgtttacttggactgtccctgtggcaccaaact
aacatcatggaaaagttgtttttgaatcaaagggaccagataaggatcta
cccccccgcccccaatatttcactttctgcatctttgaagaaatataacc
cattggacatggtttagaatattagtcaagtaaatgtcattacacagcat
aggtatggagttttattaaatctagatggatttgaaaattaaataaactg
ctataatgtgcctcctcacaacttaatttgttcaagcatggctactggac
ctacatttttctctatctttaaaagttctttgctccgaagcagatccatc
tgatcttattgattatagtaatgaaattttaaatgtctgtctctatctaa
acagaattcatgagtacattatactgagcagatgcctaagttacatagat
gacttcttctttagtatgttattatgatcaaagaaagtgtta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_71355056_71356157
seq2: B6Ng01-002A19.g_68_1159

seq1  GAATTCCTTGCTTTTCAAATACTACTGGACAGCCATTCAGGAAAAATAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTGCTTTTCAAATACTACTGGACAGCCATTCAGGAAAAATAAG  50

seq1  ATACAGTGTATTAAAGAACCTCAGAGACTTGTTATTACAATATACCCAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGTGTATTAAAGAACCTCAGAGACTTGTTATTACAATATACCCAGT  100

seq1  TGCTGCTACAGTGCCCATAAAATAATAAGGATAAGGTATGTATTGATTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCTACAGTGCCCATAAAATAATAAGGATAAGGTATGTATTGATTTC  150

seq1  AATTATCTCCTTCTTTCCAGTAAAATGAAGGGGGTTGCATAACAAAATTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATCTCCTTCTTTCCAGTAAAATGAAGGGGGTTGCATAACAAAATTA  200

seq1  AGTCTGTCAGTTAGAAAATTCTATTAAATTTAATTTAGCTATAAAAACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGTCAGTTAGAAAATTCTATTAAATTTAATTTAGCTATAAAAACAA  250

seq1  ACCATAGGAATTTCCTCCATCAATAACAATGAGCCAAATTTCAGCATCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATAGGAATTTCCTCCATCAATAACAATGAGCCAAATTTCAGCATCTC  300

seq1  ATTTCACCCTGACATTTAGCAAATTTGCTTCTAGCCAACCTCATATTCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCACCCTGACATTTAGCAAATTTGCTTCTAGCCAACCTCATATTCAA  350

seq1  GCCATTCCTTAGAAAAACAAATTTTATTGTTCGGGTTAGTTTTTCACTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATTCCTTAGAAAAACAAATTTTATTGTTCGGGTTAGTTTTTCACTCA  400

seq1  GATAACCATCTAACATTATTTAAGATTCATTGTTCTCTTTGGGACTTCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAACCATCTAACATTATTTAAGATTCATTGTTCTCTTTGGGACTTCTG  450

seq1  GCTAGGGGCATGTAACAGAGAGATAGCATTAATAAAATAGTGCTATCTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGGGGCATGTAACAGAGAGATAGCATTAATAAAATAGTGCTATCTAA  500

seq1  GATTTATTCCTATCTCAGTAGGCCTGTTAAATGTCATGTGATCCAAACCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTATTCCTATCTCAGTAGGCCTGTTAAATGTCATGTGATCCAAACCT  550

seq1  ATCAGTATTTAAAATTTCAAAGACAAACTATTGCCAAACACCTAAACATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGTATTTAAAATTTCAAAGACAAACTATTGCCAAACACCTAAACATT  600

seq1  CACCAACTTCAAAACTCTGTTTACTTGGACTGTCCCTGTGGCACCAAACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAACTTCAAAACTCTGTTTACTTGGACTGTCCCTGTGGCACCAAACT  650

seq1  AACATCATGGAAAAGTTGTTTTTGAATCAAAGGGACCAGATAAGGATCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATCATGGAAAAGTTGTTTTTGAATCAAAGGGACCAGATAAGGATCTA  700

seq1  CCCCCCCGCCCCCAATATTTCACTTTCTGCATCTTTGAAGAAATATAACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCGCCCCCAATATTTCACTTTCTGCATCTTTGAAGAAATATAACC  750

seq1  CATTGGACATGGTTTAGAATATTAGTCAAGTAAATGTCATTACACAGCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGGACATGGTTTAGAATATTAGTCAAGTAAATGTCATTACACAGCAT  800

seq1  AGGTATGGAGTTTTATTAAATCTAGATGGATTTGAAAATTAAATAAACTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTATGGAGTTTTATTAAATCTAGATGGATTTGAAAATTAAATAAACTG  850

seq1  CTATAATGTGCCTCCTCACAACTTAATTTGTTCAAGCATGGCTACTGGAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAATGTGCCTCCTCACAACTTAATTTGTTCAAGCATGGCTACTGGAC  900

seq1  CTACA-TTTTCTCTATCTTTAAAAGTTCCTTGCTCCGAAGCAGATCCATC  949
      ||||| |||||||||||||||||||||| |||||||||||||||||||||
seq2  CTACATTTTTCTCTATCTTTAAAAGTTCTTTGCTCCGAAGCAGATCCATC  950

seq1  TGATC-TATTGATTATAGTAATGAAATTTTAAAATGTCTGTCTCTATCTT  998
      ||||| |||||||||||||||||||||||| |||||||||||||||||| 
seq2  TGATCTTATTGATTATAGTAATGAAATTTT-AAATGTCTGTCTCTATCT-  998

seq1  AAACCAGAAATTCAATGAGTAACATTAATTACTGAGCAGATGCCTAAAGT  1048
       || ||| ||||| |||||| ||||||  ||||||||||||||||||  |
seq2  -AAACAG-AATTC-ATGAGT-ACATTA--TACTGAGCAGATGCCTAAGTT  1042

seq1  ACATAGAATGACTTCTTCTTTAGTATGTTATTTATGATCCAGAAGACAGT  1098
      |||||| ||||||||||||||||||||||| ||||||||   |||| |||
seq2  ACATAG-ATGACTTCTTCTTTAGTATGTTA-TTATGATC--AAAGAAAGT  1088

seq1  GTTA  1102
      ||||
seq2  GTTA  1092


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