BAC Information

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BAC

Clone NameB6Ng01-002M07
Chromosome4 (Build37)
Map Location 109,651,776 - 109,780,950
singlet/doubletdoublet
Overlap geneDmrta2
Upstream geneNrd1, Osbpl9, Calr4, Eps15, LOC666144, 4922503N01Rik, Rnf11, 4930522H14Rik, Cdkn2c, LOC100040307, Faf1
Downstream geneElavl4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-002M07.bB6Ng01-002M07.g
ACCDH840690DH840691
length7951,136
definitionDH840690|Mus musculus domesticus DNA, BAC clone: B6Ng01-002M07, 5' end.DH840691|Mus musculus domesticus DNA, BAC clone: B6Ng01-002M07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(109,651,776 - 109,652,565)(109,779,801 - 109,780,950)
sequence
gaattcttttggctgtgatcccagggccataagccgaactttgcctccaa
gttttgtcttctagttcttaccctacttctaacaggaaaaaattcttcag
ttcctttttgctcgaattcctctgcttccacattgaaagctacaattaag
accccagcccaacctgttcacctcctcaccccgcctgcacatttctctcc
tcttcacctgtccaccaaacgggatcattttgctcctttttttttttttt
tcttgctttgcctttgacatccgcttgttggtcccaagttttctctgtaa
tctgagtccctttcaggcaaatatttctcttttctcgactcaccccaatt
aacctaagctttgggcataatattttctttccaaatcctctttacattca
actgcaccaatgacttccaaacgttgtcttgtttttttccccttggcgga
actactgattcaaacgaaatcttacacgtgtagtcagatataagaggtca
gtggtgggggtgggggcgtacttgtttacagggagcttccagttcgtttc
cccagcagtttgacagccacaagtttagttaaacttgtacaaccaaagtt
tcccaaaatgggttttctgcaggccgtgcttaagcctagtgactgtatta
ccctgactcaagtatccccacttttccccgcgctaggtacagccagggag
ctgcgctcggacttgcccagcgtgcccggtgcggcgacatctccaactac
agctacgggaccacccgtgggtatcggttggcgtccggtggctgc
gaattccagcccaggcaaggagtctgcagttttattcagttagcagagag
gcaggaaaagggatttttttttttcgaatggacacatgttgtggatagat
ttagcaagaacacaggaaaaatggttagaaaggaccagatgtgagatgaa
gggggagcaaagactgatacagagcctcttttaccaaggaaaagggctgg
tcagggcctagagtgagacagactaggaaagctaggcatatgggtggcca
gtgtctcctagaagaaggtcagccccttagacctggccaacaggaacaga
tcatttctggactgagggagctgcagaggcatctgagaggcaaggagacc
ttgacagatgaatttgatcttcatgcattcatccaggcctgggaacagca
acagaagataaactggctagacacccacagcacaacacatagataggcct
gtctctgataggtccattgcaaccctcagcccatgagagtggcacagaaa
atagcaccaccatcctgaggaaagatcaattacattaacatttcaacaag
aggctctgaaggacccagaactatcagacccaccaaaggagagttgcaaa
gcacagactccacaccaggctgagggatctatgcaaagagtaaataagtt
aaaacttttaggaactgattaggcctatgtcaacactcagtaactgttgc
ctcttacagatgacctccctgtgacaaccctttataaacacaatacctgc
tgcaagttacttaacctaggaaccttcgctgaccttgcctttgaacctca
gtttctttgtctgtaaagtggggattcataaagcacttatgtaagacctg
gaataattaagtacaaagccactcttgaagccattgggcttctctggcca
agacactcatccttgaacccacatctccctctgtgccatctctggaccct
cagcacccaagggttcgttttggatctggatcacaggaggggcagtattt
tgagtgctcctgagattgggggaattgttctagttcaccccatctttcca
tgccaagtcatcgctgtctgagtctcagcagctgctgccatgcgtgcaca
tataaacactggagaaggggatccctgagagaagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_109651776_109652565
seq2: B6Ng01-002M07.b_47_841

seq1  GAATTCTTTTGGCTGTGATCCCAGGGCCATAAGCCGAACTTTGCCTCCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTGGCTGTGATCCCAGGGCCATAAGCCGAACTTTGCCTCCAA  50

seq1  GTTTTGTCTTCTAGTTCTTACCCTACTTCTAACAGGAAAAAATTCTTCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGTCTTCTAGTTCTTACCCTACTTCTAACAGGAAAAAATTCTTCAG  100

seq1  TTCCTTTTTGCTCGAATTCCTCTGCTTCCACATTGAAAGCTACAATTAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTTTGCTCGAATTCCTCTGCTTCCACATTGAAAGCTACAATTAAG  150

seq1  ACCCCAGCCCAACCTGTTCACCTCCTCACCCCGCCTGCACATTTCTCTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCAGCCCAACCTGTTCACCTCCTCACCCCGCCTGCACATTTCTCTCC  200

seq1  TCTTCACCTGTCCACCAAACGGGATCATTTTGCTCCTTTTTTTTTTTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCACCTGTCCACCAAACGGGATCATTTTGCTCCTTTTTTTTTTTTTT  250

seq1  TCTTGCTTTGCCTTTGACATCCGCTTGTTGGTCCCAAGTTTTCTCTGTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGCTTTGCCTTTGACATCCGCTTGTTGGTCCCAAGTTTTCTCTGTAA  300

seq1  TCTGAGTCCCTTTCAGGCAAATATTTCTCTTTTCTCGACTCACCCCAATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGTCCCTTTCAGGCAAATATTTCTCTTTTCTCGACTCACCCCAATT  350

seq1  AACCTAAGCTTTGGGCATAATATTTTCTTTCCAAATCCTCTTTACATTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTAAGCTTTGGGCATAATATTTTCTTTCCAAATCCTCTTTACATTCA  400

seq1  ACTGCACCAATGACTTCCAAACGTTGTCTTGTTTTTTTCCCCTTGGCGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCACCAATGACTTCCAAACGTTGTCTTGTTTTTTTCCCCTTGGCGGA  450

seq1  ACTACTGATTCAAACGAAATCTTACACGTGTAGTCAGATATAAGAGGTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACTGATTCAAACGAAATCTTACACGTGTAGTCAGATATAAGAGGTCA  500

seq1  GTGGTGGGGGTGGGGGCGTACTTGTTTACAGGGAGCTTCCAGTTCGTTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGGGGGTGGGGGCGTACTTGTTTACAGGGAGCTTCCAGTTCGTTTC  550

seq1  CCCAGCAGTTTGACAGCCACAAGTTTAGTTAAACTTGTACAACCAAAGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGCAGTTTGACAGCCACAAGTTTAGTTAAACTTGTACAACCAAAGTT  600

seq1  TCCCAAAATGGG-TTTCTGCAGGCCGTGCTTAAGCCTAGTGACTGTATTA  649
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TCCCAAAATGGGTTTTCTGCAGGCCGTGCTTAAGCCTAGTGACTGTATTA  650

seq1  CCCTGACTCAGGTATCCCCAC-TTTCCCCACGCTAGGTCCAGCCATGGAG  698
      |||||||||| |||||||||| ||||||| |||||||| |||||| ||||
seq2  CCCTGACTCAAGTATCCCCACTTTTCCCCGCGCTAGGTACAGCCAGGGAG  700

seq1  CTGCGCTCGGAGCTGCCCAGCGTGCCCGGTGCGGCGACAGCAGCAGCGAC  748
      |||||||||||  |||||||||||||||||||||||||| |  || | ||
seq2  CTGCGCTCGGACTTGCCCAGCGTGCCCGGTGCGGCGACATCTCCAACTAC  750

seq1  AGCGACGGGACCACCCGT-GGCATCGG-TGGCGT-CGGTGGCTGC  790
      ||| |||||||||||||| || ||||| |||||| ||||||||||
seq2  AGCTACGGGACCACCCGTGGGTATCGGTTGGCGTCCGGTGGCTGC  795

seq1: chr4_109779801_109780950
seq2: B6Ng01-002M07.g_68_1203 (reverse)

seq1  TCCTTC-CTCAGGGATCCCCCTTTCTCAGTGTTTTATATGTTGCAACAGC  49
      |||||| ||||||||||||| | || ||||| |||||||| ||||   ||
seq2  TCCTTCTCTCAGGGATCCCCTTCTC-CAGTG-TTTATATG-TGCA--CGC  45

seq1  ATGGCAGCAGCTGCCTGAGACTCAGGACCAGCGATGGAACTTGGCATGGA  99
      ||||||||||||| |||||||||||   ||||||||  ||||||||||||
seq2  ATGGCAGCAGCTG-CTGAGACTCAG--ACAGCGATG--ACTTGGCATGGA  90

seq1  AAGATGGGGTGAACTAGAACAATTCCCCCAAATCTTACAGGAGCACTCAA  149
      ||||||||||||||||||||||||||||| |||||  |||||||||||||
seq2  AAGATGGGGTGAACTAGAACAATTCCCCC-AATCT--CAGGAGCACTCAA  137

seq1  AATACTGCCCCTCCTGTGATTCCAGATTCAACAACGAACCCTTGGGTGCT  199
      ||||||||||||||||||| ||||||| ||| ||||||||||||||||||
seq2  AATACTGCCCCTCCTGTGA-TCCAGATCCAA-AACGAACCCTTGGGTGCT  185

seq1  GAGGGTCCAGAGATGGCACAGAGGGGAGATGTGGGTTCAGGGATGAGTGT  249
      |||||||||||||||||||||| |||||||||||||||| ||||||||||
seq2  GAGGGTCCAGAGATGGCACAGA-GGGAGATGTGGGTTCAAGGATGAGTGT  234

seq1  CTTGGCCAGAGAAG-CCAATGGCTTCAAGAGTGGCTTTGTACTTAATTAT  298
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CTTGGCCAGAGAAGCCCAATGGCTTCAAGAGTGGCTTTGTACTTAATTAT  284

seq1  TCCAGGTCTTACATAAGTGCTTTATGAATCCCCACTTTACAGACAAAGAA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGTCTTACATAAGTGCTTTATGAATCCCCACTTTACAGACAAAGAA  334

seq1  ACTGAGGTTCAAAGGCAAGGTCAGCGAAGGTTCCTAGGTTAAGTAACTTG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGGTTCAAAGGCAAGGTCAGCGAAGGTTCCTAGGTTAAGTAACTTG  384

seq1  CAGCAGGTATTGTGTTTATAAAGGGTTGTCACAGGGAGGTCATCTGTAAG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGGTATTGTGTTTATAAAGGGTTGTCACAGGGAGGTCATCTGTAAG  434

seq1  AGGCAACAGTTACTGAGTGTTGACATAGGCCTAATCAGTTCCTAAAAGTT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAACAGTTACTGAGTGTTGACATAGGCCTAATCAGTTCCTAAAAGTT  484

seq1  TTAACTTATTTACTCTTTGCATAGATCCCTCAGCCTGGTGTGGAGTCTGT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTTATTTACTCTTTGCATAGATCCCTCAGCCTGGTGTGGAGTCTGT  534

seq1  GCTTTGCAACTCTCCTTTGGTGGGTCTGATAGTTCTGGGTCCTTCAGAGC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGCAACTCTCCTTTGGTGGGTCTGATAGTTCTGGGTCCTTCAGAGC  584

seq1  CTCTTGTTGAAATGTTAATGTAATTGATCTTTCCTCAGGATGGTGGTGCT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGTTGAAATGTTAATGTAATTGATCTTTCCTCAGGATGGTGGTGCT  634

seq1  ATTTTCTGTGCCACTCTCATGGGCTGAGGGTTGCAATGGACCTATCAGAG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCTGTGCCACTCTCATGGGCTGAGGGTTGCAATGGACCTATCAGAG  684

seq1  ACAGGCCTATCTATGTGTTGTGCTGTGGGTGTCTAGCCAGTTTATCTTCT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGCCTATCTATGTGTTGTGCTGTGGGTGTCTAGCCAGTTTATCTTCT  734

seq1  GTTGCTGTTCCCAGGCCTGGATGAATGCATGAAGATCAAATTCATCTGTC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCTGTTCCCAGGCCTGGATGAATGCATGAAGATCAAATTCATCTGTC  784

seq1  AAGGTCTCCTTGCCTCTCAGATGCCTCTGCAGCTCCCTCAGTCCAGAAAT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTCTCCTTGCCTCTCAGATGCCTCTGCAGCTCCCTCAGTCCAGAAAT  834

seq1  GATCTGTTCCTGTTGGCCAGGTCTAAGGGGCTGACCTTCTTCTAGGAGAC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTGTTCCTGTTGGCCAGGTCTAAGGGGCTGACCTTCTTCTAGGAGAC  884

seq1  ACTGGCCACCCATATGCCTAGCTTTCCTAGTCTGTCTCACTCTAGGCCCT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGCCACCCATATGCCTAGCTTTCCTAGTCTGTCTCACTCTAGGCCCT  934

seq1  GACCAGCCCTTTTCCTTGGTAAAAGAGGCTCTGTATCAGTCTTTGCTCCC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAGCCCTTTTCCTTGGTAAAAGAGGCTCTGTATCAGTCTTTGCTCCC  984

seq1  CCTTCATCTCACATCTGGTCCTTTCTAACCATTTTTCCTGTGTTCTTGCT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCATCTCACATCTGGTCCTTTCTAACCATTTTTCCTGTGTTCTTGCT  1034

seq1  AAATCTATCCACAACATGTGTCCATTCGAAAAAAAAAAATCCCTTTTCCT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTATCCACAACATGTGTCCATTCGAAAAAAAAAAATCCCTTTTCCT  1084

seq1  GCCTCTCTGCTAACTGAATAAAACTGCAGACTCCTTGCCTGGGCTGGAAT  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTCTGCTAACTGAATAAAACTGCAGACTCCTTGCCTGGGCTGGAAT  1134

seq1  TC  1150
      ||
seq2  TC  1136