BAC Information

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BAC

Clone NameB6Ng01-003C12
Chromosome4 (Build37)
Map Location 35,054,312 - 35,054,655
singlet/doubletsinglet
Overlap geneMobkl2b
Upstream geneSpaca1, LOC100039220, LOC665361, LOC665367, 2700059D21Rik, Orc3l, Rars2, Slc35a1, 1700003M02Rik, Gm136, 1810030N24Rik, Zfp292, Cga
Downstream geneIfnk, 3110043O21Rik, LOC620559, LOC621227, Lingo2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-003C12.bB6Ng01-003C12.g
ACCDH840955DH840956
length4411,172
definitionDH840955|Mus musculus domesticus DNA, BAC clone: B6Ng01-003C12, 5' end.DH840956|Mus musculus domesticus DNA, BAC clone: B6Ng01-003C12, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
taagccagcctaggctacagactgaaaccctgtctcaaatatgtgataaa
ataaacaaagaaaagaaaaagaggaaaaacacaatgcattcagttgcagc
tggaaaaaatataatgtggtgaaagatagatctgaagaaaatacgttaat
gttgcagagagaagacatgtgaaagaagatctatagaaagtgaaaagtaa
attggaaaaaaattaaagcataactttaaattggattccaggaagaaaga
gaagcaatattaaaattgaaatgataaggctttgaatttcacagaattca
agcaatacatatctttttcctcctcctcctcctcctccaccaccaagatg
tcagggcggggggggggggacgcatttttaggaagagagcatggacaccc
tgggctttgaggtagattgctgtggcatctctgacccatgg
gaattctgcactaaacccatctgctcctgggcttgcttttttttttttaa
attgggagacttttaataactgtttctatttctttaggggttttgggact
atttatatggtttatctgatcctgatttaactttggtattttgtatctgt
ctagaaaactgtccatttcatccagattttccagttttgttgaatctagg
cttttgtagtaggatctgatgattctttgaatttctgaattttttgttgt
tatatctcccttttctgattttgttaatttgaatactgtctctgtgccct
ctggttagtctggctatgggtttatctatcttgttgattttctcaaagaa
caagctctcggttttgttgactctttgtatacttctttttgtttctacat
ggttgatttcagccctgagtttgatcatttcctgccatctactcctcttg
agtgtatttgcttctttttgttctagagcttccagatgtgctgtcaagct
gcctgcatatgctctccccagtttcttttggaggcactcagagctatgag
ttttcctcttagtgctgttttcattgtgtcccataagtttgggtatgttg
tgccttcattttcattaatttctaaagtctctatttctttaattatttct
tccttgaccaagttatcattaagtagagcattgttcagctttcatgtgta
tgtgggatttctgttatttttgttctcattgaagatcaaccttagtttgt
ggtgatctgataggatgcttgggactatttcaatatttttgtatgttaag
gcttgttttgtgactgattatatggccaattttgaagaagtaccatgagg
tgctgagaagaaggtatattcttttgttttaggataaaaagttctatatg
tgtctgtaaatctgttggttcattacttctgtagtttcattatgtctctg
tttagtactgttccatgatctgtccattgaggagatggggtgttgcagtc
ctcccctacttctgtgtggaggtctatatggtactttgagccatctatgc
tttctttgtgagttggggtgtcttcatacgaacaaaagatctctttgtat
agagtctctctctagtctttttacgaactatgcgccaaagctacatttgt
ctagattgagatgaccactgct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_35054312_35054655
seq2: B6Ng01-003C12.b_45_388

seq1  GAATTCTAAGCCAGCCTAGGCTACAGACTGAAACCCTGTCTCAAATATGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAGCCAGCCTAGGCTACAGACTGAAACCCTGTCTCAAATATGT  50

seq1  GATAAAATAAACAAAGAAAAGAAAAAGAGGAAAAACACAATGCATTCAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAAATAAACAAAGAAAAGAAAAAGAGGAAAAACACAATGCATTCAGT  100

seq1  TGCAGCTGGAAAAAATATAATGTGGTGAAAGATAGATCTGAAGAAAATAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGCTGGAAAAAATATAATGTGGTGAAAGATAGATCTGAAGAAAATAC  150

seq1  GTTAATGTTGCAGAGAGAAGACATGTGAAAGAAGATCTATAGAAAGTGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATGTTGCAGAGAGAAGACATGTGAAAGAAGATCTATAGAAAGTGAA  200

seq1  AAGTAAATTGGAAAAAAATTAAAGCATAACTTTAAATTGGATTCCAGGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAATTGGAAAAAAATTAAAGCATAACTTTAAATTGGATTCCAGGAA  250

seq1  GAAAGAGAAGCAATATTAAAATTGAAATGATAAGGCTTTGAATTTCACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAGAAGCAATATTAAAATTGAAATGATAAGGCTTTGAATTTCACAG  300

seq1  AATTCAAGCAATACATATCTTTTTCCTCCTCCTCCTCCTCCTCC  344
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCAAGCAATACATATCTTTTTCCTCCTCCTCCTCCTCCTCC  344