BAC Information

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BAC

Clone NameB6Ng01-004D15
Chromosome4 (Build37)
Map Location 8,078,876 - 8,080,031
singlet/doubletsinglet
Overlap geneCar8
Upstream geneLOC666700
Downstream geneLOC100039494, LOC100039505, LOC100039478, Rab2, EG666752, LOC666760, Chd7, LOC666782
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-004D15.bB6Ng01-004D15.g
ACCDH841699DH841700
length1,1351,036
definitionDH841699|Mus musculus domesticus DNA, BAC clone: B6Ng01-004D15, 5' end.DH841700|Mus musculus domesticus DNA, BAC clone: B6Ng01-004D15, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccctgaaaagctatgaaaaatacaattgcatgtgtgtacttcctg
accctcagaggctgctgaaggtcagaggctgagttcagggacaagaagtc
tgactcagctaactgactatctacaaaattatccctattaagaacaacaa
ttcaaaatcaaatctccaagatgggaagtgtttggaaatggtggcatggg
ggtagtaatggccagcagctaaaagcacctgctcttgagaggacctagaa
catggcagatcagaaaagtcagttcagggcatccaaatgcctcctctgac
accaagagtaccctccgagtacacacacatacatgaacaccaggcacaca
catagtagaaacacatacatgagcatcaggcacataacatagcacacaca
cgtacatgagcaccaggcacacacatagtagaaacacatacatgagcacc
aggcacataacatagcacacacacattagtgagcaccaggcacatacata
gcacacacacatacatgaacaccagtcacacacatagtaaaaacacatac
atgagcaccagacacataacatagcacatacacatacatgagcaccaggc
acataacatagcacacacacattcgtgagcaccaggcacatacatagcac
acacacatacatgagcaccaggcacacacatacatgagcaccaggcacac
acatagtacatacacgtatgagtaggcaaaacacttccacatacaaaata
aataaatctaaaaaatgttttaacttaaaaatctaaaaagaaatagtgat
gtgctaagaacaagaacctttctaagtggccattttccctggcactaggc
acacatctttgagtggattgtacaaattcattcaatgtgaacttagctgc
acccacctgcctcagctctagcctgaaacctacctcagagagctcaaagc
tgtagtgcataaagaaaaagactgaaactcaatgcgtatctattataagc
aatgcaactagccatcgacttcaagagcactacttacaaaagaaacaaga
aatgccaagaggagagagagtgcaacttttggatactctaaggaaagata
ctgcaaactagctctggttcaagaatcaatgcatc
gaattcctgatctttccaagacttttatcatgaatgggtgttggatcttg
tcgaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcatatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattccgttagtgagaattttattaagtatttttgc
attgatattcataagggaaattggtctgaagttctctatctttgttgggt
ctttctgtggtttaggtatcagagtaattgttgcttcatagaatgaattg
ggtagagtaccttctacttctattttgtggaatagtttgtgcagaaccgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggctttttttggttgggagactagtaatgactgcttttatttct
ttaggggatataggactgtttaggtcattaatctgatcctgatataactt
tgatacctggtatctgtctagaaatatgtgcgtgttcatccccagttctc
cagcttttttttttgtatcttttgtagaaggatctgatggtgttttggat
ttcttcagaatctgttgttatgtctcccttttcatttctgattttcttaa
ttaggatactgtccctgtgccctctggtgagtctggctaagggtttatct
atctgttgattttctcaaagaaccagctcctcgtttggtcgagtctttga
atagtcctgtttccacttggttgatttcacccctgagtttgatatttcct
gccatctactctctggtgaatttctactttttttctcgagcttttaagtg
tgtgtgaagctgctatgggtgatccctcttagtcttttgaagcacctcag
gcctatgagttttctgttagaatgcttccatggtcccataggtttgatgc
ctggcctcatttcatactccttaaaaggctcttatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_8078876_8080031
seq2: B6Ng01-004D15.b_46_1180

seq1  GAATTCCCTGAAAAGCTATGAAAAATACAATTGCATGTGTGTACTTCCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTGAAAAGCTATGAAAAATACAATTGCATGTGTGTACTTCCTG  50

seq1  ACCCTCAGAGGCTGCTGAAGGTCAGAGGCTGAGTTCAGGGACAAGAAGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTCAGAGGCTGCTGAAGGTCAGAGGCTGAGTTCAGGGACAAGAAGTC  100

seq1  TGACTCAGCTAACTGACTATCTACAAAATTATCCCTATTAAGAACAACAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCAGCTAACTGACTATCTACAAAATTATCCCTATTAAGAACAACAA  150

seq1  TTCAAAATCAAATCTCCAAGATGGGAAGTGTTTGGAAATGGTGGCATGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAATCAAATCTCCAAGATGGGAAGTGTTTGGAAATGGTGGCATGGG  200

seq1  GGTAGTAATGGCCAGCAGCTAAAAGCACCTGCTCTTGAGAGGACCTAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGTAATGGCCAGCAGCTAAAAGCACCTGCTCTTGAGAGGACCTAGAA  250

seq1  CATGGCAGATCAGAAAAGTCAGTTCAGGGCATCCAAATGCCTCCTCTGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGCAGATCAGAAAAGTCAGTTCAGGGCATCCAAATGCCTCCTCTGAC  300

seq1  ACCAAGAGTACCCTCCGAGTACACACACATACATGAACACCAGGCACACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGAGTACCCTCCGAGTACACACACATACATGAACACCAGGCACACA  350

seq1  CATAGTAGAAACACATACATGAGCATCAGGCACATAACATAGCACACACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGTAGAAACACATACATGAGCATCAGGCACATAACATAGCACACACA  400

seq1  CGTACATGAGCACCAGGCACACACATAGTAGAAACACATACATGAGCACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTACATGAGCACCAGGCACACACATAGTAGAAACACATACATGAGCACC  450

seq1  AGGCACATAACATAGCACACACACATTAGTGAGCACCAGGCACATACATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCACATAACATAGCACACACACATTAGTGAGCACCAGGCACATACATA  500

seq1  GCACACACACATACATGAACACCAGTCACACACATAGTAAAAACACATAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACACACACATACATGAACACCAGTCACACACATAGTAAAAACACATAC  550

seq1  ATGAGCACCAGACACATAACATAGCACATACACATACATGAGCACCAGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGCACCAGACACATAACATAGCACATACACATACATGAGCACCAGGC  600

seq1  ACATAACATAGCACACACACATTCGTGAGCACCAGGCACATACATAGCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAACATAGCACACACACATTCGTGAGCACCAGGCACATACATAGCAC  650

seq1  ACACACATACATGAGCACCAGGCACACACATACATGAGCACCAGGCACAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACATACATGAGCACCAGGCACACACATACATGAGCACCAGGCACAC  700

seq1  ACATAGTACATACACGTATGAGTAGGCAAAACACTTCCACATACAAAATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGTACATACACGTATGAGTAGGCAAAACACTTCCACATACAAAATA  750

seq1  AATAAATCTAAAAAATGTTTTAACTTAAAAATCTAAAAAGAAATAGTGAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATCTAAAAAATGTTTTAACTTAAAAATCTAAAAAGAAATAGTGAT  800

seq1  GTGCTAAGAACAAGAACCTTTCTAAGTGGCCATTTTCCCTGGCACTAGGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTAAGAACAAGAACCTTTCTAAGTGGCCATTTTCCCTGGCACTAGGC  850

seq1  ACACATCTTTGAGTGGATTGTACAAATTCATTCAATGTGAACTTAGCTGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATCTTTGAGTGGATTGTACAAATTCATTCAATGTGAACTTAGCTGC  900

seq1  ACCCACCTGCCTCAGCTCTAGCCTGAAACCTACCTCAGAGAGCTCAAAGC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACCTGCCTCAGCTCTAGCCTGAAACCTACCTCAGAGAGCTCAAAGC  950

seq1  TGTAGTGCATAAAAGAAAAAGACTGAAACTCAATGCGTATCTATTATAAG  1000
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTGCAT-AAAGAAAAAGACTGAAACTCAATGCGTATCTATTATAAG  999

seq1  CAATGGCAACTAGCCATCCGACTTTCCAAGAGCCACTAACTTACAAAAAG  1050
      |||| |||||||||||| ||||||  |||||| |||| ||||||||||  
seq2  CAAT-GCAACTAGCCAT-CGACTT--CAAGAG-CACT-ACTTACAAAA--  1041

seq1  GAAAACAAAGAAATGCCAAAGAGGAGAGAGAAGTGGCAAACTTTTTGAAT  1100
      ||||   |||||||||| |||||||||||| ||| ||||   ||||| ||
seq2  GAAA--CAAGAAATGCC-AAGAGGAGAGAG-AGT-GCAA--CTTTTGGAT  1084

seq1  ACTCTAAGGAAAGATACTGGAAAACTAGCCTCTGGGTTCAGAGATCCAAA  1150
      |||||||||||||||||| | ||||||| |||| ||||||   |||  ||
seq2  ACTCTAAGGAAAGATACT-GCAAACTAG-CTCT-GGTTCAAGAATC--AA  1129

seq1  TGCATC  1156
      ||||||
seq2  TGCATC  1135