BAC Information

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BAC

Clone NameB6Ng01-005H13
Chromosome4 (Build37)
Map Location 92,011,449 - 92,012,381
singlet/doubletsinglet
Overlap genenone
Upstream geneElavl2, LOC664864, LOC620016, LOC654475, 4930577H14Rik, LOC664886, 1700011H22Rik, LOC68280
Downstream geneLOC620269, LOC384125, Tusc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-005H13.bB6Ng01-005H13.g
ACCDH842597DH842598
length757935
definitionDH842597|Mus musculus domesticus DNA, BAC clone: B6Ng01-005H13, 5' end.DH842598|Mus musculus domesticus DNA, BAC clone: B6Ng01-005H13, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaacaactgtgagtgagcactcatttccttttccccatgtctca
ctgcaaatgtaccactaggacaaaatatttaaatagccttggtttagtag
aatagatatgcattataatttgtagtaagtgacttatatctcagttcatc
tacttcatgttttttttaatttttaaatctttttctactccagattttat
ttccccccagtctactctttgatggttccccatcccatacctccttccca
tcccctgtcttcacaaagaagtccccacctcaccatccctcaccccacca
gacctctaaacaccctgtcttgagggttaggtacatcttctctgactgaa
cccagaccctgctgtatatgtgttgggggtgtcatgtctgctggtgtata
cggcctggttggtagtccagtgtctgagagatctcaggaatccagagatc
tcagaagagactgctgatatgcctacggggttgccttcctcctcagcttc
ttctagctttttcctaattcatgcacaggggtcagcagcttctgtccatt
gtttgggtacaaatatctacatccgactctttcagctgcttgttggatct
ttcagaaaggcagtcatgataggtctctttttttattttttattatatat
atatatatatatatatatatatatatatatatatatatatatatatatat
atatatatatatatatatagatattgatatagagagagagagagagagag
agagaga

gaattcagctcaagacaaagtcccatggcctgactccattactgaggtta
tgggacactcacaaaaagagacctatcatgactgaatgaaaactctttag
agaatacatatacagaatatttggtaatgaaaaaataaaatataaacaac
caacctgatttaaaaagagaaatgaaatattttaaatttgaaaatattta
gatcatccctagtattgtatgaatgtatccccaactttaaatgtttcttt
aattttcttgttcacagtaaactgtctataacaccatgtccaattttaaa
agtggttgcattaataatcaacacatcataaaaatacacactggtgatca
tcaaaaaattatggaataaataatatagtacacataaacaattgactaat
gtacatgcatttagatcaaattatgacattggcaagaaaaatgggtggaa
ctaaagatcatgttaaataaattagcagaatcagaaatagaggtgtattg
acttctctttcttcacatatacatttttttaaaagaagataagaatgtca
tgagtatagcttccttaatgattcgaagagtatactgctgaaattgatac
cacggtagtaaccaacaactcaatcaaaggataatcatacccgctacaag
aaaaactacttacctacctgggttagttaacgaatagatcttagaggaga
atctatcacgtccaatatagtaaaccagcaccatttcctaatcacattct
aaatatttattctttatcctacagataagtgaaatttctatccctaataa
aagcttctctttatagctactttatagaaaatcacaaccaacctaaagaa
aatggtcagtccctcaacacacatacatatgtatgtgaatatatatatac
atatatatatgtgtgtgttgtgtatatatatatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_92011449_92012381
seq2: B6Ng01-005H13.g_70_1004

seq1  GAATTCAGCTCAAGACAAAGTCCCATGGCCTGACTCCATTACTGAGGTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCTCAAGACAAAGTCCCATGGCCTGACTCCATTACTGAGGTTA  50

seq1  TGGGACACTCACAAAAAGAGACCTATCATGACTGAATGAAAACTCTTTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGACACTCACAAAAAGAGACCTATCATGACTGAATGAAAACTCTTTAG  100

seq1  AGAATACATATACAGAATATTTGGTAATGAAAAAATAAAATATAAACAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATACATATACAGAATATTTGGTAATGAAAAAATAAAATATAAACAAC  150

seq1  CAACCTGATTTAAAAAGAGAAATGAAATATTTTAAATTTGAAAATATTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCTGATTTAAAAAGAGAAATGAAATATTTTAAATTTGAAAATATTTA  200

seq1  GATCATCCCTAGTATTGTATGAATGTATCCCCAACTTTAAATGTTTCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCATCCCTAGTATTGTATGAATGTATCCCCAACTTTAAATGTTTCTTT  250

seq1  AATTTTCTTGTTCACAGTAAACTGTCTATAACACCATGTCCAATTTTAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTCTTGTTCACAGTAAACTGTCTATAACACCATGTCCAATTTTAAA  300

seq1  AGTGGTTGCATTAATAATCAACACATCATAAAAATACACACTGGTGATCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGTTGCATTAATAATCAACACATCATAAAAATACACACTGGTGATCA  350

seq1  TCAAAAAATTATGGAATAAATAATATAGTACACATAAACAATTGACTAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAAATTATGGAATAAATAATATAGTACACATAAACAATTGACTAAT  400

seq1  GTACATGCATTTAGATCAAATTATGACATTGGCAAGAAAAATGGGTGGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACATGCATTTAGATCAAATTATGACATTGGCAAGAAAAATGGGTGGAA  450

seq1  CTAAAGATCATGTTAAATAAATTAGCAGAATCAGAAATAGAGGTGTATTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAGATCATGTTAAATAAATTAGCAGAATCAGAAATAGAGGTGTATTG  500

seq1  ACTTCTCTTTCTTCACATATACATTTTTTTAAAAGAAGATAAGAATGTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTCTTTCTTCACATATACATTTTTTTAAAAGAAGATAAGAATGTCA  550

seq1  TGAGTATAGCTTCCTTAATGATTCGAAGAGTATACTGCTGAAATTGATAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTATAGCTTCCTTAATGATTCGAAGAGTATACTGCTGAAATTGATAC  600

seq1  CACGGTAGTAACCAACAACTCAATCAAAGGATAATCATACCCGCTACAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGGTAGTAACCAACAACTCAATCAAAGGATAATCATACCCGCTACAAG  650

seq1  AAAAACTACTTACCTACCTGGGTTAGTTAACGAATAGATCTTAGAGGAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACTACTTACCTACCTGGGTTAGTTAACGAATAGATCTTAGAGGAGA  700

seq1  ATCTATCACGTCCAATATAGTAAACCAGCACCA-TTCCTAATCACATTCT  749
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  ATCTATCACGTCCAATATAGTAAACCAGCACCATTTCCTAATCACATTCT  750

seq1  AAATATTTATTCTTTATCCTACAGATAAGTGAAATTTCTATCCCTAATAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTTATTCTTTATCCTACAGATAAGTGAAATTTCTATCCCTAATAA  800

seq1  AAGCTTCTCTTTATAGCTACTTTATAGAAAATCACAACCAACCTAAAGAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTCTCTTTATAGCTACTTTATAGAAAATCACAACCAACCTAAAGAA  850

seq1  AATGGTCAGT-CCTCAACACACATACATATGTATGTGAATATATATATAC  898
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  AATGGTCAGTCCCTCAACACACATACATATGTATGTGAATATATATATAC  900

seq1  ATATATATATGTGTGTG-TGTGTATATTATATATAT  933
      ||||||||||||||||| |||||||| |||||||||
seq2  ATATATATATGTGTGTGTTGTGTATA-TATATATAT  935


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