BAC Information

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BAC

Clone NameB6Ng01-006H13
Chromosome4 (Build37)
Map Location 70,487,919 - 70,489,172
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC433716, LOC100039888, LOC242497, LOC671064, Cdk5rap2, Megf9
Downstream geneLOC100039565, LOC100039979, LOC667638, EG667649
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-006H13.bB6Ng01-006H13.g
ACCDH843321DH843322
length1,248938
definitionDH843321|Mus musculus domesticus DNA, BAC clone: B6Ng01-006H13, 5' end.DH843322|Mus musculus domesticus DNA, BAC clone: B6Ng01-006H13, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatctgagtgtccctttctttctttttactagcagaaattctaca
gcatactttattctgcccagccaatgactaccatttattgacaaggcaga
gaataaatggtaagaaatgtttaaacaaagttgaggaaggagatttttgg
taaaggcattacaatgctatgcctggattgaaacaagatatgagggcaga
gaaatcaatattttaataatccaagggcaacaatacacagcatacagaat
attatgcctacagaaaacagaaaaaaatcaacttaaaagtgataaagttc
aagcaaattagaataagatatagatattagtaaaccataatttcttgata
ttggtttattgattggaacatatactaaactaatattgtgtgtgtgtgtg
tgtgcatgcatgtgtgtgtctttgtagtatatgtgagccaaagtataata
gcaaacatgttaattagaaagataaataaaaaataagatgactaataaaa
atgttattgaagttattggaagtaatagaattgtcacattgtggtgaatt
tcccaatcttggaacatgatttggcagtatcttcaaagctgagattactt
gtaattgagtgaacattagacagttgaatagaaatggagaatatttgatc
agcaaaagagttcataagagcatggtctacaaaagctctaataaaaactg
atagtaaaacatagaaatggaatatattcacaaagtaaaacaaagaaatt
aatgaccaacactcttcctaaaattaccagttgtagtagtgaataaggtg
ccagctttatttaccatcaccttcagcaacctcatcaccatgaatgtttt
aggaaccacagcatagataaaatatggtctgtatagttgtctaaaaaaag
gaatttcatggggatccaggagcagatagagtttgagacatctagaagat
ttatttttagtttaatatctgttttattgtttaagatcccatacatgtgc
atgatgtattttgatcaaatctttcctccattttcctcccttctaatctc
tccccaacctcctccatgacttttccattttgtaatataagatttccgcc
cagggttaagaaggaaggaggtatgtaggttgaaataaacccacttagaa
cttaaccccctgctctaagagaagatatccactcctgtcttccaatgcct
atggttagaaattgcctgaccttagagtattttctgaaagtattcctt

gaattcctgtggctccttggacacagaatttctttgaagaaacttcacct
tcaagcttcagcaagacagaatgttgagctccactgtcttcaagaaaact
aatgtttttccctccactttgggagttatcctggggaaggggaggggttc
caatcccatcccccttcttcatctttagtttcatcatttaaggtcaggct
tcttctttctcttggagcattccctggtccagtgacccttcttataataa
gcttattgtttctttcccaagtgggggttttcttgacccttagggtcccc
cttacctccttctttggaaaccatctgttttaggtgtctcctatggtctt
ctggtttggccatggctgccaacaggatctttgccaggtcaagagtttgt
tgcctctctcctttcatctgtcttttcttccattcatttttctgctttca
tctgcttctcctctgcacattctctcccattaaacacttcttctgccact
atcactaactttctcagtttcttttctcctaacctttcaaccttctggag
ctttctcttgatatatggtgatgcctgattgataaaggctagagttactg
ctgaatttgcttctggtgattcaggatcaatgagagtatattgtcagaat
gtctccatgactctctctaagaaagttgctggggggctcccatatctttc
ttgactaatgtcatacactttggccaggttagtggtctgtgctgccatgt
tgagacctgctaacagagcctgatataaaccttcagtggtgtcccagttt
gggcagttcgagaaaaaccagcaccaatagctgattggttattggcgagt
tcccctgaggggctaggaatcagcttccttggcctttctctgggttctct
ttctctgtggtgaaaagaacctgaaaagctggtggcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_70487919_70489172
seq2: B6Ng01-006H13.b_45_1292

seq1  GAATTCATCTGAGTGTCCCTTTCTTTCTTTTTACTAGCAGAAATTCTACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCTGAGTGTCCCTTTCTTTCTTTTTACTAGCAGAAATTCTACA  50

seq1  GCATACTTTATTCTGCCCAGCCAATGACTACCATTTATTGACAAGGCAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATACTTTATTCTGCCCAGCCAATGACTACCATTTATTGACAAGGCAGA  100

seq1  GAATAAATGGTAAGAAATGTTTAAACAAAGTTGAGGAAGGAGATTTTTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAAATGGTAAGAAATGTTTAAACAAAGTTGAGGAAGGAGATTTTTGG  150

seq1  TAAAGGCATTACAATGCTATGCCTGGATTGAAACAAGATATGAGGGCAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGCATTACAATGCTATGCCTGGATTGAAACAAGATATGAGGGCAGA  200

seq1  GAAATCAATATTTTAATAATCCAAGGGCAACAATACACAGCATACAGAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATCAATATTTTAATAATCCAAGGGCAACAATACACAGCATACAGAAT  250

seq1  ATTATGCCTACAGAAAACAGAAAAAAATCAACTTAAAAGTGATAAAGTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGCCTACAGAAAACAGAAAAAAATCAACTTAAAAGTGATAAAGTTC  300

seq1  AAGCAAATTAGAATAAGATATAGATATTAGTAAACCATAATTTCTTGATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAATTAGAATAAGATATAGATATTAGTAAACCATAATTTCTTGATA  350

seq1  TTGGTTTATTGATTGGAACATATACTAAACTAATATTGTGTGTGTGTGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTTATTGATTGGAACATATACTAAACTAATATTGTGTGTGTGTGTG  400

seq1  TGTGCATGCATGTGTGTGTCTTTGTAGTATATGTGAGCCAAAGTATAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCATGCATGTGTGTGTCTTTGTAGTATATGTGAGCCAAAGTATAATA  450

seq1  GCAAACATGTTAATTAGAAAGATAAATAAAAAATAAGATGACTAATAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAACATGTTAATTAGAAAGATAAATAAAAAATAAGATGACTAATAAAA  500

seq1  ATGTTATTGAAGTTATTGGAAGTAATAGAATTGTCACATTGTGGTGAATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTATTGAAGTTATTGGAAGTAATAGAATTGTCACATTGTGGTGAATT  550

seq1  TCCCAATCTTGGAACATGATTTGGCAGTATCTTCAAAGCTGAGATTACTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAATCTTGGAACATGATTTGGCAGTATCTTCAAAGCTGAGATTACTT  600

seq1  GTAATTGAGTGAACATTAGACAGTTGAATAGAAATGGAGAATATTTGATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTGAGTGAACATTAGACAGTTGAATAGAAATGGAGAATATTTGATC  650

seq1  AGCAAAAGAGTTCATAAGAGCATGGTCTACAAAAGCTCTAATAAAAACTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAAGAGTTCATAAGAGCATGGTCTACAAAAGCTCTAATAAAAACTG  700

seq1  ATAGTAAAACATAGAAATGGAATATATTCACAAAGTAAAACAAAGAAATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTAAAACATAGAAATGGAATATATTCACAAAGTAAAACAAAGAAATT  750

seq1  AATGACCAACACTCTTCCTAAAATTACCAGTTGTAGTAGTGAATAAGGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACCAACACTCTTCCTAAAATTACCAGTTGTAGTAGTGAATAAGGTG  800

seq1  CCAGCTTTATTTACCATCACCTTCAGCAACCTCATCACCATGAATGTTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTTTATTTACCATCACCTTCAGCAACCTCATCACCATGAATGTTTT  850

seq1  AGGAACCACAGCATAGATAAAATATGGTCTGTATAGTTGTCTAAAAAAAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACCACAGCATAGATAAAATATGGTCTGTATAGTTGTCTAAAAAAAG  900

seq1  GAATTTCATGGGGATCCAGGAGCAGATAGAGTTTGAGACATCTAGAAGAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTCATGGGGATCCAGGAGCAGATAGAGTTTGAGACATCTAGAAGAT  950

seq1  TTATTTTTAGTTTAATAATCTGTTTTATTGTTTAAGAATCCCATACATGT  1000
      |||||||||||||||| ||||||||||||||||||| |||||||||||||
seq2  TTATTTTTAGTTTAAT-ATCTGTTTTATTGTTTAAG-ATCCCATACATGT  998

seq1  GCATGATGTATTTTGATCAAATCTTTCCCCCATTTT-CTCCCTTCTAATC  1049
      |||||||||||||||||||||||||||| ||||||| |||||||||||||
seq2  GCATGATGTATTTTGATCAAATCTTTCCTCCATTTTCCTCCCTTCTAATC  1048

seq1  TCTCCCCAACCTCCTCCATGACTTTTCCA-TTTGTAATATAGATTTTCAG  1098
      ||||||||||||||||||||||||||||| |||||||||||   |||| |
seq2  TCTCCCCAACCTCCTCCATGACTTTTCCATTTTGTAATATAAGATTTCCG  1098

seq1  CACAAAGGTTAAG-AGGAA-GAGGTATGTAGGTAGAAATAAAACACACAT  1146
      | | | ||||||| ||||| ||||||||||||| ||||| |||| ||| |
seq2  C-CCAGGGTTAAGAAGGAAGGAGGTATGTAGGTTGAAAT-AAACCCAC-T  1145

seq1  AAGAACATAACCACTAGCTTCTAAGAGAAGATCACATCT-CTGTCTTTAC  1195
       ||||| ||||| |  || |||||||||||||  |  || ||||| || |
seq2  TAGAACTTAACCCCCTGC-TCTAAGAGAAGATATCCACTCCTGTC-TTCC  1193

seq1  AATAGCTATGTGTATGATTTGGGCTGAACTTTTAAGA-TATTTTCCTAAA  1244
      |||  ||||| ||  ||  | | |||| |||   ||| |||||| || ||
seq2  AATGCCTATG-GTTAGAAATTGCCTGACCTT---AGAGTATTTT-CTGAA  1238

seq1  AGTATTCCTT  1254
      ||||||||||
seq2  AGTATTCCTT  1248


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