BAC Information

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BAC

Clone NameB6Ng01-007D14
Chromosome4 (Build37)
Map Location 146,706,796 - 146,823,214
singlet/doubletdoublet
Overlap geneLOC666581, EG666588, LOC627701
Upstream geneLOC433790, LOC433791, Rex2, LOC100043012, LOC100041461, LOC630093, OTTMUSG00000010105, LOC666445, MGC117846, OTTMUSG00000010694, LOC626480, LOC666474, LOC666482, LOC434514, LOC626288, LOC666498, LOC100043034, LOC666514, LOC100041561, LOC100041570, OTTMUSG00000010657, LOC384087, LOC666546, LOC666557, LOC545716, LOC666574
Downstream geneOTTMUSG00000010671, LOC545718, OTTMUSG00000010673, 2610305D13Rik, LOC666618, LOC100043100, LOC666640, LOC194189, LOC666652, LOC100041677, LOC277692, MGC67181, D4Wsu114e, Fv1, Mfn2, Plod1, 2510039O18Rik, Nppb, Nppa, Clcn6, Mthfr, LOC433806, Agtrap, 2610109H07Rik, Mad2l2, Fbxo6, Fbxo44, Fbxo2, Ptchd2, Ubiad1, Frap1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-007D14.bB6Ng01-007D14.g
ACCDH843861DH843862
length1,0011,034
definitionDH843861|Mus musculus domesticus DNA, BAC clone: B6Ng01-007D14, 5' end.DH843862|Mus musculus domesticus DNA, BAC clone: B6Ng01-007D14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(146,822,214 - 146,823,214)(146,706,796 - 146,707,626)
sequence
gaattcttctaagcccacctacttatgtaccttttaattaattagcttcc
cacttcttcacagcaatttttgtttttttggatttttgcttgcttgcttc
cttgcttgcttgcttgttcctttgcttttaatttttctttttcttaaact
catctaatcgtgcaggaatcccacactccccatcaggaaccactcctcca
actctgttgccttccacacaactccccaggacctactctgcacagcttct
tcacaaagttgctgccagactagaccagagctggatgtagtaggacactg
cacctgggttctgaacccttcagatacaatggatcctgtctaacttctca
tattgtgcgtgtagccttctgggctataaatgcaaaaaattaagcagtcc
ctttgaactctgatgctcagaacagatacccaaaacaaacaaaaacgtag
ataaaatgtccttggctcaaaccacaaaccatagaggtatccaataagga
gcacaatttatgtgatacccaagacaaagaattgaaaacccacagtcatg
atcaagggcattaaagtttgtaaaccatgtgaatccactcagacaggaac
aaaatgaatcttgggtaagaaaataataccagatgcctgaaggaaataag
gacaatataaaatattaaaattgagttcaataggtggttagaaatgctaa
aaaaagaaaaatcctgaagagaaaatgcactgaggcaaataaaattgata
catagagaacctgtgggagacagattatcagacttaaagaaaaagtagag
gaggtggatgcctcaatcaaagaaaatggtgaattaaaatgatgttaggt
caaggcacaatattatttactgcttgaaggatgaggcaataaagagaaac
tccttcgaaaaactgtcctgatctttgtcaaaaaaaaaaaaaaaagtaag
aaaggaagtaagacgaagaatgagatagaaataatagatagggagataga
g
gaattcatacaggagagaaaccttacaaatgcagtgaatgtggcaaatgc
tttactgaaaaaagcagtctgagaattcatcagagaattcatacaggaga
gaaaccttacaaatgcaatgaatgtggcaaatgctttactgaaaaaagca
gtctgagaattcatcagagaattcatacaggagagaaaccttacaaatgc
agtgaatgtggcaaatgctttactgtaaaaagcagtctgagaattcatca
gagaattcatacaggagagaaaccttacaaatgcagtgaatgtgacaaat
gctttaccaaacaatccaatcttagtattcatcagagaattcatacagga
gagaaaccttacaaatgcagtgaatgtgaaaaatgcttttcccgaaaatt
acatcttggtattcatcagagaattcatacaggagagagaccttacaaat
gcagtgaatgtgaaaaatgcttttcccgaaaattccatcttggtattcat
cagagaattcatacaggaaagaaaccttacaaatagattgtatgtgacaa
atacaatactcacaatgtcagtcttagaaatcatcagttatttcatacag
tagagaatctttataaatgaagtaaatgaggcaattctttaccaagatat
attatctcaaaattcattagagaatacttagagaagacaaacttttcaaa
tatattgtaggtatgaatcctttccttttggcctatttcctagactgtaa
cagtgaatacttacaggctagaaacttaactcatgcattgtatgaagaaa
tatctttgacttcatttcaggtcagagagaacatctaagaactttttagg
gtaaagtatttctgttggggaaaatggtgtattcttgacaacacttgagg
cttcacactagagattagtatgattatgaaaatcttgtgaaaatttcatg
caatgttcaaatcttaagttatgtcactatttatgctgtgagaacttctg
aaatgtgaaatgtagaaagctttcatgacctttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_146822214_146823214
seq2: B6Ng01-007D14.b_44_1044 (reverse)

seq1  CTCTCTCTCCCTCTCT-CTCTTTCTCTCTCTTTCTTCCTTCTTACTTCCT  49
      |||| ||||||| |||  | ||||| |||| ||||| | |||||||||||
seq2  CTCTATCTCCCTATCTATTATTTCTATCTCATTCTT-CGTCTTACTTCCT  49

seq1  TTCCTTAC-TTTTTTTTTTTTTTTGACAAAGATCAGGACAGTTTTTCGAA  98
      || ||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TT-CTTACTTTTTTTTTTTTTTTTGACAAAGATCAGGACAGTTTTTCGAA  98

seq1  GGAGTTTCTCTTTATTGCCTCATCCTTCAAGCAGTAAATAATATTGTGCC  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTTTCTCTTTATTGCCTCATCCTTCAAGCAGTAAATAATATTGTGCC  148

seq1  TTGACCTAACATCATTTTAATTCACCATTTTCTTTGATTGAGGCATCCAC  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACCTAACATCATTTTAATTCACCATTTTCTTTGATTGAGGCATCCAC  198

seq1  CTCCTCTACTTTTTCTTTAAGTCTGATAATCTGTCTCCCACAGGTTCTCT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCTACTTTTTCTTTAAGTCTGATAATCTGTCTCCCACAGGTTCTCT  248

seq1  ATGTATCAATTTTATTTGCCTCAGTGCATTTTCTCTTCAGGATTTTTCTT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATCAATTTTATTTGCCTCAGTGCATTTTCTCTTCAGGATTTTTCTT  298

seq1  TTTTTAGCATTTCTAACCACCTATTGAACTCAATTTTAATATTTTATATT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAGCATTTCTAACCACCTATTGAACTCAATTTTAATATTTTATATT  348

seq1  GTCCTTATTTCCTTCAGGCATCTGGTATTATTTTCTTACCCAAGATTCAT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTTATTTCCTTCAGGCATCTGGTATTATTTTCTTACCCAAGATTCAT  398

seq1  TTTGTTCCTGTCTGAGTGGATTCACATGGTTTACAAACTTTAATGCCCTT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTCCTGTCTGAGTGGATTCACATGGTTTACAAACTTTAATGCCCTT  448

seq1  GATCATGACTGTGGGTTTTCAATTCTTTGTCTTGGGTATCACATAAATTG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCATGACTGTGGGTTTTCAATTCTTTGTCTTGGGTATCACATAAATTG  498

seq1  TGCTCCTTATTGGATACCTCTATGGTTTGTGGTTTGAGCCAAGGACATTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCCTTATTGGATACCTCTATGGTTTGTGGTTTGAGCCAAGGACATTT  548

seq1  TATCTACGTTTTTGTTTGTTTTGGGTATCTGTTCTGAGCATCAGAGTTCA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTACGTTTTTGTTTGTTTTGGGTATCTGTTCTGAGCATCAGAGTTCA  598

seq1  AAGGGACTGCTTAATTTTTTGCATTTATAGCCCAGAAGGCTACACGCACA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGACTGCTTAATTTTTTGCATTTATAGCCCAGAAGGCTACACGCACA  648

seq1  ATATGAGAAGTTAGACAGGATCCATTGTATCTGAAGGGTTCAGAACCCAG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGAGAAGTTAGACAGGATCCATTGTATCTGAAGGGTTCAGAACCCAG  698

seq1  GTGCAGTGTCCTACTACATCCAGCTCTGGTCTAGTCTGGCAGCAACTTTG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAGTGTCCTACTACATCCAGCTCTGGTCTAGTCTGGCAGCAACTTTG  748

seq1  TGAAGAAGCTGTGCAGAGTAGGTCCTGGGGAGTTGTGTGGAAGGCAACAG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAAGCTGTGCAGAGTAGGTCCTGGGGAGTTGTGTGGAAGGCAACAG  798

seq1  AGTTGGAGGAGTGGTTCCTGATGGGGAGTGTGGGATTCCTGCACGATTAG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGGAGGAGTGGTTCCTGATGGGGAGTGTGGGATTCCTGCACGATTAG  848

seq1  ATGAGTTTAAGAAAAAGAAAAATTAAAAGCAAAGGAACAAGCAAGCAAGC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGTTTAAGAAAAAGAAAAATTAAAAGCAAAGGAACAAGCAAGCAAGC  898

seq1  AAGGAAGCAAGCAAGCAAAAATCCAAAAAAACAAAAATTGCTGTGAAGAA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAGCAAGCAAGCAAAAATCCAAAAAAACAAAAATTGCTGTGAAGAA  948

seq1  GTGGGAAGCTAATTAATTAAAAGGTACATAAGTAGGTGGGCTTAGAAGAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGAAGCTAATTAATTAAAAGGTACATAAGTAGGTGGGCTTAGAAGAA  998

seq1  TTC  1001
      |||
seq2  TTC  1001

seq1: chr4_146706796_146707626
seq2: B6Ng01-007D14.g_277_1100

seq1  GCAAATGCTTTACTGTAAAAAGCAGTCTGAGAATTCATCAGAGAATTCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATGCTTTACTGTAAAAAGCAGTCTGAGAATTCATCAGAGAATTCAT  50

seq1  ACAGGAGAGAAACCTTACAAATGCAGTGAATGTGACAAATGCTTTACCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAGAGAAACCTTACAAATGCAGTGAATGTGACAAATGCTTTACCAA  100

seq1  ACAATCCAATCTTAGTATTCATCAGAGAATTCATACAGGAGAGAAACCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATCCAATCTTAGTATTCATCAGAGAATTCATACAGGAGAGAAACCTT  150

seq1  ACAAATGCAGTGAATGTGAAAAATGCTTTTCCCGAAAATTACATCTTGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATGCAGTGAATGTGAAAAATGCTTTTCCCGAAAATTACATCTTGGT  200

seq1  ATTCATCAGAGAATTCATACAGGAGAGAGACCTTACAAATGCAGTGAATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATCAGAGAATTCATACAGGAGAGAGACCTTACAAATGCAGTGAATG  250

seq1  TGAAAAATGCTTTTCCCGAAAATTCCATCTTGGTATTCATCAGAGAATTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAATGCTTTTCCCGAAAATTCCATCTTGGTATTCATCAGAGAATTC  300

seq1  ATACAGGAAAGAAACCTTACAAATAGATTGTATGTGACAAATACAATACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGGAAAGAAACCTTACAAATAGATTGTATGTGACAAATACAATACT  350

seq1  CACAATGTCAGTCTTAGAAATCATCAGTTATTTCATACAGTAGAGAATCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAATGTCAGTCTTAGAAATCATCAGTTATTTCATACAGTAGAGAATCT  400

seq1  TTATAAATGAAGTAAATGAGGCAATTCTTTACCAAGATATATTATCTCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAATGAAGTAAATGAGGCAATTCTTTACCAAGATATATTATCTCAA  450

seq1  AATTCATTAGAGAATACTTAGAGAAGACAAACTTTTCAAATATATTGTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCATTAGAGAATACTTAGAGAAGACAAACTTTTCAAATATATTGTAG  500

seq1  GTATGAATCCTTTCCTTTTGGCCTATTTCCTAGACTGTAACAGTGAATAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGAATCCTTTCCTTTTGGCCTATTTCCTAGACTGTAACAGTGAATAC  550

seq1  TTACAGGCTAGAAACTTAACTCATGCATTGTATGAAGAAATATCTTTGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGGCTAGAAACTTAACTCATGCATTGTATGAAGAAATATCTTTGAC  600

seq1  TTCATTTCAGGTCAGAGAGAACATCTAAGAACTTTTTAGGGTAAAGTATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTTCAGGTCAGAGAGAACATCTAAGAACTTTTTAGGGTAAAGTATT  650

seq1  TCTGTTGGGGAAAATGGTGTATTCTTGACAACACTTGAGGCTCCACACTA  700
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TCTGTTGGGGAAAATGGTGTATTCTTGACAACACTTGAGGCTTCACACTA  700

seq1  GAGAATTAGTATGATTATGAAAATCTTGTGAAAATATTCATGCAATGTTC  750
      ||| ||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GAG-ATTAGTATGATTATGAAAATCTTGTGAAAAT-TTCATGCAATGTTC  748

seq1  AAATCTTAGGTAATGTCAACTATTTATGCTGTGAGAAACTCTGAAAATGT  800
      |||||||| || ||||| |||||||||||||||||||  |||| ||||||
seq2  AAATCTTAAGTTATGTC-ACTATTTATGCTGTGAGAACTTCTG-AAATGT  796

seq1  GAAATGTAGAAAGCTTTTCATGACACCTTTT  831
      |||||||||||||| |||||||  |||||||
seq2  GAAATGTAGAAAGC-TTTCATG--ACCTTTT  824