BAC Information

Click to search

BAC

Clone NameB6Ng01-007K12
Chromosome4 (Build37)
Map Location 4,162,453 - 4,163,425
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039044, LOC631371, LOC666513, Tmem68, Tgs1, Lyn, LOC621858, Rps20, Mos, Plag1, Chchd7, LOC666586, Rdhe2, 4833413O15Rik, Penk1, A830012C17Rik
Downstream geneLOC100039297, LOC622019, Impad1, LOC100039338
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-007K12.bB6Ng01-007K12.g
ACCDH844157DH844158
length9721,164
definitionDH844157|Mus musculus domesticus DNA, BAC clone: B6Ng01-007K12, 5' end.DH844158|Mus musculus domesticus DNA, BAC clone: B6Ng01-007K12, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaattcttcaacacagaattctttactttggagccagcccactg
tcatttcctccatcctctctgctttccacaaatgtgtgtcatcacctgtt
ctcccattcttgaagtgtcaccttgggaaggttactggatattcccatcc
ttcattatctttatttgagaaatgctaaaagttgtatgaagatttaacta
aatgcttatataagttagaataaagttccttggtggctattacactgttt
ttgtttttgtttgtttttgttttttttgttgttgttgttgtttttccatt
ttcagctctttttcacttgataataactaatttaaaatgcaggttttggt
attatgtaaataacagtaattactatgtaaatgatagaagagactaccat
tggaaagggtatgtcattatactcagaccttactagaggggaacctacca
cactgttagactacacagaatctgcacagttaggcagtagttacaggggc
aggacatgtaggaaacaggaaagaatatataaacagttagagatttgcta
gcttgagtatctcagagctctagaacacagaaatgtcttgtcacaaaggg
ttgatgaggaccaaaggagagtgggcagagcagaaaagcccaaaggaaga
agtaaactgtgatattgggtagctgcttcctcaaggttgagacagtctct
tctggagagaagacatgggggacccaagaaactcacaaaatttacaaaac
tagtaaggcccctatccaattagatgaacagtaacaattgccagggaaag
gggagatttccatgagtgggcctcacagaattgttgcagaggccctactg
attcagcttacacaatcacacttcacctgtgctcctgatgcagctgccta
gatcacacaacatgctgatcactaatgagatcactctcaataggaagaat
aactcttttgaaatgatgtgga
gaattctcacccgaggaataccgaaaggctgagaaacacctgaaaaaatg
ttcaacatccttaatcatcagagaaatgcaaatcaaaacaaccctgagat
tccatctcacaccagtcagagtggctaagatcaaaaattcaggtgacagg
agatgctggtgaggatgtggagaaaggggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gataattgcacatagtactaccggaggatcccgcaatacctctcctgggc
atatatccagaagatgtcccaaccggtaagaaggacacatgctccactat
gttcatagcagccttgtttataatagccagaagctggaaagaacccagtt
gtccctcaacagaggaatggatacaaaaatgtggtacatttacacaatgg
agtactactcagctattaaaaagaatgaattcacgaaattcctaggcaaa
tggttggacctggagggcatcatcctgagtgaggtaacccaatcacaaaa
gaactcaaatgaaatgtactcactgataagtggatattagcccagaaact
tagtatagcgagatataaggtacaatatgtaaaacatatgaaactgaaga
agaacgaagaccaaagtgtggacactttgctcattcttagaattggaaac
aatcacccatggaaggagttacagagacaaagtttggagctgagacaaaa
ggatggtccatctagagactgccatatccagggatccatcccataattag
cctccaagcgatgacactgttgcatacactagcaagcctttgttgcaagg
acggtgatatagctgtcccttgtgagactaggccggggcctagcaacaca
gaagtggatgctccacagtcaactattgggatggatcacagggtctccat
ggaggatctagagaagtatccaacgagctaaagagattctgcacctttcg
gaggaacatatggactaaccatgaccccgaactcttgactctagctgcat
tgtattcaaatatactattcggcatcactggaaagagaggccattgtcag
gcatactttaagtcccgattaaggaagtgcaggcccaaaatggtaatgct
ggtaggaggaatgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_4162453_4163425
seq2: B6Ng01-007K12.b_46_1017 (reverse)

seq1  TCCACATCATTTC-AAAGAGTTATTTCTTTCCCTATTGAGAGTGATCTCA  49
      ||||||||||||| ||||||||| |||||  |||||||||||||||||||
seq2  TCCACATCATTTCAAAAGAGTTA-TTCTT--CCTATTGAGAGTGATCTCA  47

seq1  TTAGTGATCAGCATGTTGTGTGATCTAGGCAGCTGCATCAGGAGCACAGG  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGATCAGCATGTTGTGTGATCTAGGCAGCTGCATCAGGAGCACAGG  97

seq1  TGAAGTGTGATTGTGTAAGCTGAATCAGTAGGGCCTCTGCAACAATTCTG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTGTGATTGTGTAAGCTGAATCAGTAGGGCCTCTGCAACAATTCTG  147

seq1  TGAGGCCCACTCATGGAAATCTCCCC-TTCCCTGGCAATTGTTACTGTTC  198
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TGAGGCCCACTCATGGAAATCTCCCCTTTCCCTGGCAATTGTTACTGTTC  197

seq1  ATCTAATTGGATAGGGGCCTTACTAGTTTTGTAAATTTTGTGAGTTTCTT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAATTGGATAGGGGCCTTACTAGTTTTGTAAATTTTGTGAGTTTCTT  247

seq1  GGGTCCCCCATGTCTTCTCTCCAGAAGAGACTGTCTCAACCTTGAGGAAG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCCCCCATGTCTTCTCTCCAGAAGAGACTGTCTCAACCTTGAGGAAG  297

seq1  CAGCTACCCAATATCACAGTTTACTTCTTCCTTTGGGCTTTTCTGCTCTG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTACCCAATATCACAGTTTACTTCTTCCTTTGGGCTTTTCTGCTCTG  347

seq1  CCCACTCTCCTTTGGTCCTCATCAACCCTTTGTGACAAGACATTTCTGTG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTCTCCTTTGGTCCTCATCAACCCTTTGTGACAAGACATTTCTGTG  397

seq1  TTCTAGAGCTCTGAGATACTCAAGCTAGCAAATCTCTAACTGTTTATATA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGAGCTCTGAGATACTCAAGCTAGCAAATCTCTAACTGTTTATATA  447

seq1  TTCTTTCCTGTTTCCTACATGTCCTGCCCCTGTAACTACTGCCTAACTGT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCCTGTTTCCTACATGTCCTGCCCCTGTAACTACTGCCTAACTGT  497

seq1  GCAGATTCTGTGTAGTCTAACAGTGTGGTAGGTTCCCCTCTAGTAAGGTC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGATTCTGTGTAGTCTAACAGTGTGGTAGGTTCCCCTCTAGTAAGGTC  547

seq1  TGAGTATAATGACATACCCTTTCCAATGGTAGTCTCTTCTATCATTTACA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTATAATGACATACCCTTTCCAATGGTAGTCTCTTCTATCATTTACA  597

seq1  TAGTAATTACTGTTATTTACATAATACCAAAACCTGCATTTTAAATTAGT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAATTACTGTTATTTACATAATACCAAAACCTGCATTTTAAATTAGT  647

seq1  TATTATCAAGTGAAAAAGAGCTGAAAATGGAAAAACAACAACAACAACAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATCAAGTGAAAAAGAGCTGAAAATGGAAAAACAACAACAACAACAA  697

seq1  AAAAAACAAAAACAAACAAAAACAAAAACAGTGTAATAGCCACCAAGGAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAACAAAAACAAACAAAAACAAAAACAGTGTAATAGCCACCAAGGAA  747

seq1  CTTTATTCTAACTTATATAAGCATTTAGTTAAATCTTCATACAACTTTTA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATTCTAACTTATATAAGCATTTAGTTAAATCTTCATACAACTTTTA  797

seq1  GCATTTCTCAAATAAAGATAATGAAGGATGGGAATATCCAGTAACCTTCC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTCTCAAATAAAGATAATGAAGGATGGGAATATCCAGTAACCTTCC  847

seq1  CAAGGTGACACTTCAAGAATGGGAGAACAGGTGATGACACACATTTGTGG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGTGACACTTCAAGAATGGGAGAACAGGTGATGACACACATTTGTGG  897

seq1  AAAGCAGAGAGGATGGAGGAAATGACAGTGGGCTGGCTCCAAAGTAAAGA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAGAGAGGATGGAGGAAATGACAGTGGGCTGGCTCCAAAGTAAAGA  947

seq1  ATTCTGTGTTGAAGAATTTGAATTC  973
      |||||||||||||||||||||||||
seq2  ATTCTGTGTTGAAGAATTTGAATTC  972