BAC Information

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BAC

Clone NameB6Ng01-008A13
Chromosome4 (Build37)
Map Location 75,570,701 - 75,571,216
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC636847, 3110001D03Rik, LOC623529, LOC100039833, LOC100039884, LOC667845
Downstream genePtprd, LOC667858, LOC667862
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-008A13.bB6Ng01-008A13.g
ACCDH844429DH844430
length1,2581,134
definitionDH844429|Mus musculus domesticus DNA, BAC clone: B6Ng01-008A13, 5' end.DH844430|Mus musculus domesticus DNA, BAC clone: B6Ng01-008A13, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacatattaaaagcagtatacagcaaacta
gtagccaaaatttaataaatggagagagacttgatgtgatcccactgaac
tcagagaggagacaagtctcccctctctctccctacctattcaatatggt
gttccaaattcctagaaagggaaattagacaacaaaacgaggtcaaaggg
atgcaaattggaaaggaagatgtcaatatatcagtatttacagataataa
aatagtatgcttaagtgcccccccccaccaaagccccacaagaattctcc
tatagctgataaacaacttcagcaaagttggtggatacaaaattgactca
aagaaatcagtggcctttctctactgaaaggataaacagcctgagaaaga
aagtagaaaaacaacacccttaacaatagtaacaaaatataaaatacctt
ggtgtgactcttactaagcaagtgaaagacctatatgacaagaacttcaa
gtctctgaagaaagaaatcaaagatctctgaagatggaaagatctcccat
gctcatgaattagcaggattaatatagtaaaaatggccttcttgcaaaaa
gcaatctacagattcaatgcaatcccatccaaattccaactcaattcttc
atagagttagaaacagtaagtttcaaattcatctgtaacaacctgagaga
acttctatgggaatgaacatctctgacctcaaggtttactacagagcaat
tgtgattaaaactgcatgatattattacagtgacaagcaggtagatgaat
agaatagaattgaagacccagaaatgaatccacacatctatggtcacttg
atctagacaaaggagctaaaccacccagtggaaaagacagcattttcaac
aaattgtgctggtacaactggcagttagcatgaagaagactacaaatcaa
tccattcttatctacttctacaacgctcaagtccaagtggattcaggact
tccacaaaactagatacactgaaactaatagaaaagaagtggggaagagc
ttcaagcacatggtcactcggaaaatttcctgaacagtcaccaagtagcc
taatgctttaagatacaaaaattgacaatagacctcatacccttgctaat
gcttttgcagccaaatgaacattgtcatatctgacaaacgcactatgatt
gggaggtctttccgacctcacttcgttgatgaggcgctaaatattcacta
ttatcatc
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaacttgacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctcagtgaggtaacacactcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacggagtttggagctgagatga
aaggatggaccatgtagagactgccatagccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacgcagatgtagctgtctcttgtgagactatgccgggcccagcaaaca
cagaagtggatgctcacagtcagctaatggatggatcatagggctcccaa
tggagagctagagaaagtagccaggagctaaaggatctgcatcctatagg
tggaacaacattatgagctaccagtactccggagtcttgactctagctgc
aaattatcaaagaatggtctagtcggcatactggaagagagggtcattga
cttgcaaacttaattgcctcagtacagggtaata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_75570701_75571216
seq2: B6Ng01-008A13.g_999_1202 (reverse)

seq1  TATTACCCTGTACTGAGGGTTATTTATTTATTTATTTATTTATCTTATTT  50
                                                        
seq2  --------------------------------------------------  0

seq1  ATAAGGAAAAGCATTCTGAGGTCAAAATACAGTAAGAGGGATTTTTGTTA  100
                                                        
seq2  --------------------------------------------------  0

seq1  GAAGTTTGTAAAAATTTTCAAGACTACTTTCTTGTAACTTGAGTATGTAC  150
                                                        
seq2  --------------------------------------------------  0

seq1  GGGTAGTGAGCGGAGAGAAATTGGTCAATTTCAGAAATAAGATCTTTATT  200
                                                        
seq2  --------------------------------------------------  0

seq1  AGGTATTTAGCTCATTTACATTTCCAATGCTATACCAAAAGTCCCCCTTA  250
                                                        
seq2  --------------------------------------------------  0

seq1  CCCACCCACCCCCACTCCCCTACCCACCCACTCCCCCCCTTTGGCCCTGG  300
                                                        
seq2  --------------------------------------------------  0

seq1  CGTTCCCCTGTACCGGGGCACACAAAGTCTGCGTGTCCAATGGGCCTCTC  350
        || |||||||| | |||| |  |||| |||  || |||||  ||||||
seq2  TATTACCCTGTACTGAGGCA-ATTAAGTTTGCAAGT-CAATGACCCTCTC  48

seq1  TTTCCAGTGATGGCCGACTAGGCCATCTTTTGATACATATGCAGCTAGAG  400
       ||||||| || ||||||||| ||||  ||||||| || |||||||||||
seq2  -TTCCAGT-AT-GCCGACTAGACCATTCTTTGATA-ATTTGCAGCTAGAG  94

seq1  TCAAGAGCTCAGGGGTACTGGTTAGTTCATAATGTTGTTCCACCTATAGG  450
      |||||| ||| || ||||||| ||| |||||||||||||||||||||| |
seq2  TCAAGA-CTCCGGAGTACTGG-TAGCTCATAATGTTGTTCCACCTATA-G  141

seq1  GTTGAAGATCCCTTTAGCTCCTTGGGTACTTTCTCTAGCTCCTCCATTGG  500
      | || |||| ||||||||||| ||| |||||||||||||| |||||||||
seq2  GATGCAGAT-CCTTTAGCTCC-TGGCTACTTTCTCTAGCT-CTCCATTGG  188

seq1  GAGCCCTGTGATCCAT  516
      ||||||| ||||||||
seq2  GAGCCCTATGATCCAT  204